RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 YKT6O15498 198 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 FSTL3O95633 263 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 IGHV1-46P01743 117 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 APOA1P02647 267 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 RLN2P04090 185 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 IGLV7-43P04211 117 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 SEC11BP0C7V7 166 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 SLC35E2BP0CK96 405 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 CASQ1P31415 396 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 MPIP34949 423 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 ARR3P36575 388 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 MAGEA6P43360 314 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 RANBP1P43487 201 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 RPS11P62280 158 aaKnown RBP eCLIP1.12□□□□□ -2.23
CPSF3-205ENST00000489629 RPL10AP62906 217 aaKnown RBP1.12□□□□□ -2.23
CPSF3-205ENST00000489629 ADIGQ0VDE8 80 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 STX4Q12846 297 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 MAPRE2Q15555 327 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 ZNF404Q494X3 552 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 ACTBL2Q562R1 376 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 TMEM69Q5SWH9 247 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 SYT6Q5T7P8 510 aaPredicted RBP1.12□□□□□ -2.23
CPSF3-205ENST00000489629 RESP18Q5W5W9 173 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 ZNF470Q6ECI4 717 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 TPGS1Q6ZTW0 290 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 DAZ4Q86SG3 579 aaKnown RBP1.12□□□□□ -2.23
CPSF3-205ENST00000489629 MARCH3Q86UD3 253 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 OR6K2Q8NGY2 324 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 FAM57AQ8TBR7 257 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 FXYD5Q96DB9 178 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 SMIM8Q96KF7 97 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 DERL3Q96Q80 235 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 METTL26Q96S19 204 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 SEC22CQ9BRL7 303 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 COPS4Q9BT78 406 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 BBS2Q9BXC9 721 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 ANGPTL4Q9BY76 406 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 TBL1XR1Q9BZK7 514 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 GOLPH3Q9H4A6 298 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 METTL17Q9H7H0 456 aaPredicted RBP1.12□□□□□ -2.23
CPSF3-205ENST00000489629 C6orf50Q9HD87 102 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 DAZ1Q9NQZ3 744 aaKnown RBP1.12□□□□□ -2.23
CPSF3-205ENST00000489629 MS4A12Q9NXJ0 267 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 VAPAQ9P0L0 249 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 RAB22AQ9UL26 194 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 SLC7A11Q9UPY5 501 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 CFL2Q9Y281 166 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 ZNF706Q9Y5V0 76 aaPredicted RBP1.12□□□□□ -2.23
CPSF3-205ENST00000489629 MUC6Q6W4X9 2439 aa1.12□□□□□ -2.23
CPSF3-205ENST00000489629 NPHP4O75161 1426 aaPredicted RBP1.12□□□□□ -2.23
CPSF3-205ENST00000489629 IZUMO1RA6ND01 250 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 HSBP1L1C9JCN9 74 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 F8VP50 259 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 SMLR1H3BR10 107 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 SGCEO43556 437 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 GATCO43716 136 aaKnown RBP1.11□□□□□ -2.23
CPSF3-205ENST00000489629 PFN1P07737 140 aaKnown RBP1.11□□□□□ -2.23
CPSF3-205ENST00000489629 HLA-GP17693 338 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 LGALS3P17931 250 aaKnown RBP1.11□□□□□ -2.23
CPSF3-205ENST00000489629 TAC1P20366 129 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 SYT1P21579 422 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 TEAD1P28347 426 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 FLI1Q01543 452 aaPredicted RBP1.11□□□□□ -2.23
CPSF3-205ENST00000489629 ATP5G2Q06055 141 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 MEF2CQ06413 473 aaPredicted RBP1.11□□□□□ -2.23
CPSF3-205ENST00000489629 TRDNQ13061 729 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 TOMM34Q15785 309 aaPredicted RBP1.11□□□□□ -2.23
CPSF3-205ENST00000489629 TMEM241Q24JQ0 296 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 KRTAP13-4Q3LI77 160 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 CLLU1OSQ5K130 101 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 KCTD16Q68DU8 428 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 FAM131AQ6UXB0 335 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 ADM2Q7Z4H4 148 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 NT5DC3Q86UY8 548 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 ITPRIPQ8IWB1 547 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 CYP4Z2PQ8N1L4 340 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 SPICQ8N5J4 248 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 ZFP62Q8NB50 900 aaPredicted RBP1.11□□□□□ -2.23
CPSF3-205ENST00000489629 DRAXINQ8NBI3 349 aaPredicted RBP1.11□□□□□ -2.23
CPSF3-205ENST00000489629 ZNF680Q8NEM1 530 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 ZNF555Q8NEP9 628 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 DOK4Q8TEW6 326 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 ORAOV1Q8WV07 137 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 TMEM239Q8WW34 195 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 C22orf15Q8WYQ4 148 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 ZMYND19Q96E35 227 aaPredicted RBP1.11□□□□□ -2.23
CPSF3-205ENST00000489629 ZBED3Q96IU2 234 aaPredicted RBP1.11□□□□□ -2.23
CPSF3-205ENST00000489629 QKIQ96PU8 341 aaKnown RBP eCLIP1.11□□□□□ -2.23
CPSF3-205ENST00000489629 CIB1Q99828 191 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 ZNF436Q9C0F3 470 aaPredicted RBP1.11□□□□□ -2.23
CPSF3-205ENST00000489629 RDH14Q9HBH5 336 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 SPACA1Q9HBV2 294 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 TMBIM4Q9HC24 238 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 VCX3AQ9NNX9 186 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 TMEM38BQ9NVV0 291 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 NLE1Q9NVX2 485 aaPredicted RBP1.11□□□□□ -2.23
CPSF3-205ENST00000489629 TAS2R13Q9NYV9 303 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 STX18Q9P2W9 335 aaKnown RBP1.11□□□□□ -2.23
CPSF3-205ENST00000489629 HMGXB4Q9UGU5 601 aa1.11□□□□□ -2.23
CPSF3-205ENST00000489629 PRO0628Q9UI54 55 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms