RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 PELI1Q96FA3 418 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 OPALINQ96PE5 141 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 SEBOXQ9HB31 216 aaPredicted RBP11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 GLS2Q9UI32 602 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 RNF114Q9Y508 228 aa11.27□□□□□ -0.61
SPTLC1-207ENST00000488921 TRBV2A0A0J9YWF9 115 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 ZNF737O75373 536 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 IGHA1P01876 353 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 CCL3L1P16619 93 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 POU3F4P49335 361 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 LGALS4P56470 323 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 EDDM3BP56851 147 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 ZNF273Q14593 569 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 AANATQ16613 207 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 SPIN3Q5JUX0 258 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 HCP5Q6MZN7 132 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 ZSCAN4Q8NAM6 433 aaPredicted RBP11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 RHOXF1Q8NHV9 184 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 PPP1R35Q8TAP8 253 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 SNX22Q96L94 193 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 COMMD4Q9H0A8 199 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 RPL36Q9Y3U8 105 aaKnown RBP11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 PCDHGB5Q9Y5G0 923 aa11.26□□□□□ -0.61
SPTLC1-207ENST00000488921 TRRAPQ9Y4A5 3859 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 IGKV1-9A0A0C4DH69 117 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 TMEM212A6NML5 194 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 OR4C45A6NMZ5 311 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 F8VVB4 439 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 F8VWA3 439 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 INMTO95050 263 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 CLIC3O95833 236 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 HAND1O96004 215 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 CCDC159P0C7I6 412 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 PIPP12273 146 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 MEF2CQ06413 473 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 LRRC75BQ2VPJ9 315 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 KLHL22Q53GT1 634 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 LHFPL3Q86UP9 236 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 FAM58AQ8N1B3 248 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 OR13D1Q8NGV5 346 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 LINC01006Q8NI28 216 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 CPNE2Q96FN4 548 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 CNBD2Q96M20 576 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 ZNF714Q96N38 554 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 SSX3Q99909 188 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 MEGF9Q9H1U4 602 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 C16orf95Q9H693 158 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 RHOFQ9HBH0 211 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 RAB18Q9NP72 206 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 AASSQ9UDR5 926 aa11.25□□□□□ -0.61
SPTLC1-207ENST00000488921 hADV38S2A0JD32 116 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 C17orf98A8MV24 154 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 H3BUX3 64 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 TIMM23O14925 209 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 MT-ND2P03891 347 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 ZNF728P0DKX0 622 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 PRKACAP17612 351 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 BCL3P20749 454 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 GABRR1P24046 479 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 COX7A1P24310 79 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 GBX2P52951 348 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 PDZK1IP1Q13113 114 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 MED21Q13503 144 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 ZNF146Q15072 292 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 GRK1Q15835 563 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 TREML4Q6UXN2 200 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 ZNF782Q6ZMW2 699 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 LIAT1Q6ZQX7 453 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 Q6ZSV7 163 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 C11orf42Q8N5U0 333 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 OR51A4Q8NGJ6 313 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 OR13C9Q8NGT0 318 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 FOXRED1Q96CU9 486 aaPredicted RBP11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 CITED1Q99966 193 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 ANKRD60Q9BZ19 345 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 ZCCHC4Q9H5U6 513 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 MRPS18AQ9NVS2 196 aaKnown RBP11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 RBFOX1Q9NWB1 397 aaKnown RBP11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 ERVK13-1Q9NX77 482 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 MYRFQ9Y2G1 1151 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 TBL2Q9Y4P3 447 aaKnown RBP11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 LINC00312Q9Y6C7 94 aa11.24□□□□□ -0.61
SPTLC1-207ENST00000488921 M0QZ24 198 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 DENRO43583 198 aaKnown RBP11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 TSPAN9O75954 239 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 CLPXO76031 633 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 ALX3O95076 343 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 GNAO1P09471 354 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 MYF6P23409 242 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 NPBWR2P48146 333 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 BMXP51813 675 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 DLX6P56179 175 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 EDDM3AQ14507 147 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 SERPINA12Q8IW75 414 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 SAXO1Q8IYX7 474 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 DTX3Q8N9I9 347 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 OR52I1Q8NGK6 324 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 OR5D14Q8NGL3 314 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 OR10AC1Q8NH08 325 aa11.23□□□□□ -0.61
SPTLC1-207ENST00000488921 OR5AK2Q8NH90 309 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms