RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 ZNF404Q494X3 552 aa10.31□□□□□ -0.76
TRAIP-209ENST00000488860 STUMQ69YW2 141 aa10.31□□□□□ -0.76
TRAIP-209ENST00000488860 ELP2Q6IA86 826 aa10.31□□□□□ -0.76
TRAIP-209ENST00000488860 Q96MF0 132 aa10.31□□□□□ -0.76
TRAIP-209ENST00000488860 TMEM246Q9BRR3 403 aa10.31□□□□□ -0.76
TRAIP-209ENST00000488860 NICN1Q9BSH3 213 aa10.31□□□□□ -0.76
TRAIP-209ENST00000488860 URM1Q9BTM9 101 aaKnown RBP10.31□□□□□ -0.76
TRAIP-209ENST00000488860 ETV7Q9Y603 341 aa10.31□□□□□ -0.76
TRAIP-209ENST00000488860 CR1P17927 2039 aa10.31□□□□□ -0.76
TRAIP-209ENST00000488860 DOCK11Q5JSL3 2073 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 IGKV1D-17A0A075B6S4 117 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 A0A1B0GW55 424 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 HSPB6O14558 160 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 GEMIN2O14893 280 aaKnown RBP10.3□□□□□ -0.76
TRAIP-209ENST00000488860 ADAM20O43506 726 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 OR7C1O76099 320 aaPredicted RBP10.3□□□□□ -0.76
TRAIP-209ENST00000488860 DUX4L2P0CJ85 424 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 DUX4L3P0CJ86 424 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 DUX4L4P0CJ87 422 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 DUX4L5P0CJ88 424 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 DUX4L6P0CJ89 424 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 DUX4L7P0CJ90 424 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 RPS2P15880 293 aaKnown RBP10.3□□□□□ -0.76
TRAIP-209ENST00000488860 CPT2P23786 658 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 NR4A2P43354 598 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 RPS27AP62979 156 aaKnown RBP10.3□□□□□ -0.76
TRAIP-209ENST00000488860 QRFPP83859 136 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 IL13RA2Q14627 380 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 TAF9Q16594 264 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 SPIN3Q5JUX0 258 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 MZT2AQ6P582 158 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 DUX4L9Q6RFH8 374 aaPredicted RBP10.3□□□□□ -0.76
TRAIP-209ENST00000488860 SPICQ8N5J4 248 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 FAM216BQ8N7L0 139 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 SAMD12Q8N8I0 201 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 ASCC1Q8N9N2 400 aaKnown RBP10.3□□□□□ -0.76
TRAIP-209ENST00000488860 MCFD2Q8NI22 146 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 ACOT12Q8WYK0 555 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 KCTD12Q96CX2 325 aaKnown RBP10.3□□□□□ -0.76
TRAIP-209ENST00000488860 Q96M66 194 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 CCL13Q99616 98 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 FOXC2Q99958 501 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 MRI1Q9BV20 369 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 C6orf62Q9GZU0 229 aaPredicted RBP10.3□□□□□ -0.76
TRAIP-209ENST00000488860 ATG5Q9H1Y0 275 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 TMEM165Q9HC07 324 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 ZNF581Q9P0T4 197 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 DUX4Q9UBX2 424 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 METRNQ9UJH8 293 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 RAB22AQ9UL26 194 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 SPATA2Q9UM82 520 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 PCDHB10Q9UN67 800 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 NAV2Q8IVL1 2488 aa10.3□□□□□ -0.76
TRAIP-209ENST00000488860 PRRC2AP48634 2157 aaKnown RBP10.29□□□□□ -0.76
TRAIP-209ENST00000488860 CEACAM18A8MTB9 384 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 SH2D1BO14796 132 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 LDLRAD4O15165 306 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 TMPRSS2O15393 492 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 RGS5O15539 181 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 TMEM127O75204 238 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 OR2H2O95918 312 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 SELLP14151 372 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 SLC25A16P16260 332 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 RAB6AP20340 208 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 PRDX2P32119 198 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 SCAND1P57086 179 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 COL10A1Q03692 680 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 ZNF146Q15072 292 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 MPV17LQ2QL34 196 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 CNPY1Q3B7I2 92 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 TMEM155Q4W5P6 130 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 UBE2NLQ5JXB2 153 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 NKAPLQ5M9Q1 402 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 ATAD3CQ5T2N8 411 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 SHEQ5VZ18 495 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 LYPD2Q6UXB3 125 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 DCDC5Q6ZRR9 648 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 LINC00596Q86U02 117 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 LRRC28Q86X40 367 aaPredicted RBP10.29□□□□□ -0.76
TRAIP-209ENST00000488860 KRTAP1-3Q8IUG1 177 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 CD177Q8N6Q3 437 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 TMEM185AQ8NFB2 350 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 ANGPTL6Q8NI99 470 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 MRPS24Q96EL2 167 aaKnown RBP10.29□□□□□ -0.76
TRAIP-209ENST00000488860 GAFA1Q96PS6 74 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 SLIRPQ9GZT3 109 aaKnown RBP10.29□□□□□ -0.76
TRAIP-209ENST00000488860 LPAR5Q9H1C0 372 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 ZNF665Q9H7R5 613 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 RHBDL2Q9NX52 303 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 ZNF222Q9UK12 451 aa10.29□□□□□ -0.76
TRAIP-209ENST00000488860 A0A0A6YYD4 124 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 IGHV4-61A0A0C4DH41 118 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 VWC2LB2RUY7 222 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 FAM25AB3EWG3 89 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 FAM25CB3EWG5 89 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 FAM25GB3EWG6 89 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 DEGS1O15121 323 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 HPGDSO60760 199 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 VEGFCP49767 419 aa10.28□□□□□ -0.76
TRAIP-209ENST00000488860 NHLRC3Q5JS37 347 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms