RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 GHSRQ92847 366 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 EMG1Q92979 244 aaKnown RBP13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 SMIM19Q96E16 107 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 HMG20AQ9NP66 347 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 NOX4Q9NPH5 578 aa13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 CHCHD3Q9NX63 227 aaKnown RBP13.06□□□□□ -0.32
CTDSP1-209ENST00000488627 A0A0U1RQK1 487 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 HOXA3O43365 443 aaPredicted RBP13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 HAND1O96004 215 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 CYB5AP00167 134 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 DUSP1P28562 367 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 DLX6P56179 175 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 RPS11P62280 158 aaKnown RBP eCLIP13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 KLRD1Q13241 179 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 MED21Q13503 144 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 ZNF273Q14593 569 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 C6orf141Q5SZD1 244 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 AHSA2Q719I0 299 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 FAM185AQ8N0U4 392 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 ZSCAN4Q8NAM6 433 aaPredicted RBP13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 OR52N4Q8NGI2 321 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 OR13C5Q8NGS8 318 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 PGLYRP3Q96LB9 341 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 ZMAT3Q9HA38 289 aaKnown RBP13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 ZNF281Q9Y2X9 895 aa13.05□□□□□ -0.32
CTDSP1-209ENST00000488627 TRBV5-5A0A0J9YX44 114 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 PSPNO60542 156 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 MELTFP08582 738 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 OCM2P0CE71 109 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 OCMP0CE72 109 aaPredicted RBP13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 CCL3L1P16619 93 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 PRKACAP17612 351 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 ERVFRD-1P60508 538 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 ACTG1P63261 375 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 OR8H2Q8N162 312 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 PNKDQ8N490 385 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 NANOGP1Q8N7R0 232 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 ZFP41Q8N8Y5 198 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 ASCC1Q8N9N2 400 aaKnown RBP13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 TBC1D15Q8TC07 691 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 GCDHQ92947 438 aaPredicted RBP13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 TMEM106AQ96A25 262 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 SLC25A28Q96A46 364 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 SNX22Q96L94 193 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 NEK6Q9HC98 313 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 TAS2R4Q9NYW5 299 aa13.04□□□□□ -0.32
CTDSP1-209ENST00000488627 ANK2Q01484 3957 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 ALDOBP05062 364 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 HCKP08631 526 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 HKR1P10072 659 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 RAB3AP20336 220 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 UBE2E1P51965 193 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 GUCA2AQ02747 115 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 BLMHQ13867 455 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 SPIN3Q5JUX0 258 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 RNLSQ5VYX0 342 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 NCR3LG1Q68D85 454 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 C16orf87Q6PH81 154 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 TCF23Q7RTU1 214 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 STX19Q8N4C7 294 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 OR4S1Q8NGB4 309 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 OR5D13Q8NGL4 314 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 SGCDQ92629 289 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 ORAI1Q96D31 301 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 AJUBAQ96IF1 538 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 RHOFQ9HBH0 211 aa13.03□□□□□ -0.32
CTDSP1-209ENST00000488627 A0A1W2PRD5 423 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 A0A1W2PRF3 423 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 A0A1W2PRM7 423 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 C17orf98A8MV24 154 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 NPFFO15130 113 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 GPX5O75715 221 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 CDK1P06493 297 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 CD2P06729 351 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 TMEM225BP0DP42 221 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 IGFBP3P17936 291 aaPredicted RBP13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 LMO1P25800 156 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 YIF1BQ5BJH7 314 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 Q6P435 159 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 ASCL4Q6XD76 172 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 LDLRAD3Q86YD5 345 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 TMEM86BQ8N661 226 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 Q8NFD4 153 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 PXT1Q8NFP0 134 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 TAF15Q92804 592 aaKnown RBP eCLIP13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 PAK1IP1Q9NWT1 392 aaPredicted RBP13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 GSTK1Q9Y2Q3 226 aa13.02□□□□□ -0.33
CTDSP1-209ENST00000488627 TRBV5-7A0A0A0MS05 114 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 PTGES3LE9PB15 166 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 GABRPO00591 440 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 OR2H2O95918 312 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 CD1AP06126 327 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 MYF6P23409 242 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 EEF1B2P24534 225 aaKnown RBP13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 SAA4P35542 130 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 IER3P46695 156 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 OR3A1P47881 315 aa13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 SNU13P55769 128 aaKnown RBP13.01□□□□□ -0.33
CTDSP1-209ENST00000488627 WNT4P56705 351 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms