RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 OR56B1Q8NGI3 324 aa11.93□□□□□ -0.5
COPS7B-221ENST00000488111 OTOSQ8NHW6 89 aa11.93□□□□□ -0.5
COPS7B-221ENST00000488111 FNDC9Q8TBE3 224 aa11.93□□□□□ -0.5
COPS7B-221ENST00000488111 YPEL4Q96NS1 127 aa11.93□□□□□ -0.5
COPS7B-221ENST00000488111 LOC390937A0A1W2PQ73 354 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 RAB27BO00194 218 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 DNPH1O43598 174 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 IFNA2P01563 188 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 CTLA4P16410 223 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 SULT1A1P50225 295 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 UCP2P55851 309 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 SLC22A6Q4U2R8 563 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 COMMD1Q8N668 190 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 PNLDC1Q8NA58 520 aaKnown RBP11.92□□□□□ -0.5
COPS7B-221ENST00000488111 ACBD4Q8NC06 268 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 SLAMF9Q96A28 289 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 MARS2Q96GW9 593 aaKnown RBP11.92□□□□□ -0.5
COPS7B-221ENST00000488111 PRDM13Q9H4Q3 707 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 GDF2Q9UK05 429 aaPredicted RBP11.92□□□□□ -0.5
COPS7B-221ENST00000488111 RHBDD3Q9Y3P4 386 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 DSPP15924 2871 aaKnown RBP11.92□□□□□ -0.5
COPS7B-221ENST00000488111 IGKV1D-43A0A0B4J1Z2 117 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 LOC102725191A0A1B0GVB3 256 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 MEGF11A6BM72 1044 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 M0R036 132 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 VAMP5O95183 116 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 PNPP00491 289 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 NTF4P34130 210 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 IL15RAQ13261 267 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 TMEM128Q5BJH2 165 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 CDPF1Q6NVV7 123 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 SSX9Q7RTT3 188 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 LYPD6Q86Y78 171 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 ZIC4Q8N9L1 334 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 OR10H5Q8NGA6 315 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 MARCH1Q8TCQ1 289 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 KCNK17Q96T54 332 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 PRRG4Q9BZD6 226 aa11.92□□□□□ -0.5
COPS7B-221ENST00000488111 A6NIZ1 184 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 ZNF726A6NNF4 738 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 ZNF716A6NP11 495 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 ADAP1O75689 374 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 YIF1AO95070 293 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 SFT2D2O95562 160 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 CST4P01036 141 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 SNCAP37840 140 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 RBP2P50120 134 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 RIDAP52758 137 aaKnown RBP11.91□□□□□ -0.5
COPS7B-221ENST00000488111 RAP1BP61224 184 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 RAB1AP62820 205 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 RAP1AP62834 184 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 MEP1BQ16820 701 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 DNLZQ5SXM8 178 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.91□□□□□ -0.5
COPS7B-221ENST00000488111 REC114Q7Z4M0 266 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 CISD2Q8N5K1 135 aaKnown RBP11.91□□□□□ -0.5
COPS7B-221ENST00000488111 Q8NA96 180 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 POC1AQ8NBT0 407 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 OR51A2Q8NGJ7 313 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 OR51F2Q8NH61 342 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 PPP1R14AQ96A00 147 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 TMEM230Q96A57 120 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 SLC25A44Q96H78 314 aaPredicted RBP11.91□□□□□ -0.5
COPS7B-221ENST00000488111 SPACA1Q9HBV2 294 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 PARPBPQ9NWS1 579 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 VSX1Q9NZR4 365 aaPredicted RBP11.91□□□□□ -0.5
COPS7B-221ENST00000488111 B9D1Q9UPM9 204 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 FLVCR1Q9Y5Y0 555 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 NPIPB13A6NJU9 1138 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 NPIPB4C9JG80 1138 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 SLC31A2O15432 143 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 SYNGR4O95473 234 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 GAPDHP04406 335 aaKnown RBP11.91□□□□□ -0.5
COPS7B-221ENST00000488111 ARG1P05089 322 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 PET100P0DJ07 73 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 HKR1P10072 659 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 CLRN1P58418 232 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 RAB32Q13637 225 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 RPUSD3Q6P087 351 aaKnown RBP11.91□□□□□ -0.5
COPS7B-221ENST00000488111 HIST2H3AQ71DI3 136 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 DMRTC2Q8IXT2 367 aaPredicted RBP11.91□□□□□ -0.5
COPS7B-221ENST00000488111 OR1J1Q8NGS3 322 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 GFOD1Q9NXC2 390 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 RAB22AQ9UL26 194 aa11.91□□□□□ -0.5
COPS7B-221ENST00000488111 A0A1W2PPE2 198 aa11.9□□□□□ -0.5
COPS7B-221ENST00000488111 CEACAM18A8MTB9 384 aa11.9□□□□□ -0.5
COPS7B-221ENST00000488111 CYTIPO60759 359 aa11.9□□□□□ -0.5
COPS7B-221ENST00000488111 IFNA6P05013 189 aa11.9□□□□□ -0.5
COPS7B-221ENST00000488111 PGA4P0DJD7 388 aa11.9□□□□□ -0.5
COPS7B-221ENST00000488111 PGA3P0DJD8 388 aa11.9□□□□□ -0.5
COPS7B-221ENST00000488111 HIST1H1BP16401 226 aaKnown RBP11.9□□□□□ -0.5
COPS7B-221ENST00000488111 TAS2R60P59551 318 aa11.9□□□□□ -0.5
COPS7B-221ENST00000488111 KIAA0141Q14154 515 aaPredicted RBP11.9□□□□□ -0.5
COPS7B-221ENST00000488111 ABLIM2Q6H8Q1 611 aa11.9□□□□□ -0.5
COPS7B-221ENST00000488111 HEPN1Q6WQI6 88 aa11.9□□□□□ -0.5
COPS7B-221ENST00000488111 ZNF679Q8IYX0 411 aa11.9□□□□□ -0.5
COPS7B-221ENST00000488111 OR6X1Q8NH79 312 aa11.9□□□□□ -0.5
COPS7B-221ENST00000488111 C2orf50Q96LR7 162 aa11.9□□□□□ -0.5
COPS7B-221ENST00000488111 C20orf24Q9BUV8 137 aa11.9□□□□□ -0.5
COPS7B-221ENST00000488111 SF3B5Q9BWJ5 86 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms