RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 DHDHQ9UQ10 334 aa16.7■□□□□ 0.26
HDAC4-209ENST00000487617 TENM1Q9UKZ4 2725 aa16.69■□□□□ 0.26
HDAC4-209ENST00000487617 PRKACAP17612 351 aa16.69■□□□□ 0.26
HDAC4-209ENST00000487617 DUSP1P28562 367 aa16.69■□□□□ 0.26
HDAC4-209ENST00000487617 SNU13P55769 128 aaKnown RBP16.69■□□□□ 0.26
HDAC4-209ENST00000487617 ADARB1P78563 741 aaKnown RBP16.69■□□□□ 0.26
HDAC4-209ENST00000487617 TMPRSS11AQ6ZMR5 421 aa16.69■□□□□ 0.26
HDAC4-209ENST00000487617 RNF144BQ7Z419 303 aa16.69■□□□□ 0.26
HDAC4-209ENST00000487617 OR8H2Q8N162 312 aa16.69■□□□□ 0.26
HDAC4-209ENST00000487617 OR5D18Q8NGL1 313 aa16.69■□□□□ 0.26
HDAC4-209ENST00000487617 DYRK2Q92630 601 aa16.69■□□□□ 0.26
HDAC4-209ENST00000487617 HEXA-AS1Q9H8Q6 139 aa16.69■□□□□ 0.26
HDAC4-209ENST00000487617 SEBOXQ9HB31 216 aaPredicted RBP16.69■□□□□ 0.26
HDAC4-209ENST00000487617 GLS2Q9UI32 602 aa16.69■□□□□ 0.26
HDAC4-209ENST00000487617 TMEM82A0PJX8 343 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 BTBD17A6NE02 478 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 POM121CA8CG34 1229 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 GPR137BO60478 399 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 HCKP08631 526 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 MYL12AP19105 171 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 GABRR1P24046 479 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 RAG2P55895 527 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 IL18R1Q13478 541 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 EDDM3AQ14507 147 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 MIDNQ504T8 468 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 OR2G6Q5TZ20 316 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 SHISA2Q6UWI4 295 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 C11orf42Q8N5U0 333 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 PARP16Q8N5Y8 322 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 OR4F5Q8NH21 305 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 C1RLQ9NZP8 487 aa16.68■□□□□ 0.26
HDAC4-209ENST00000487617 IGKV1-12A0A0C4DH73 117 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 MEX3AA1L020 520 aaKnown RBP16.67■□□□□ 0.26
HDAC4-209ENST00000487617 SULT1B1O43704 296 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 IGKV1D-12P01611 117 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 COX7A1P24310 79 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 ERVFRD-1P60508 538 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 RPL15P61313 204 aaKnown RBP16.67■□□□□ 0.26
HDAC4-209ENST00000487617 ZNF146Q15072 292 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 GRK1Q15835 563 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 TAF9Q16594 264 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 CCDC58Q4VC31 144 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 SPIN3Q5JUX0 258 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 OGFRL1Q5TC84 451 aaPredicted RBP16.67■□□□□ 0.26
HDAC4-209ENST00000487617 XAF1Q6GPH4 301 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 RPL22L1Q6P5R6 122 aaKnown RBP16.67■□□□□ 0.26
HDAC4-209ENST00000487617 C17orf107Q6ZR85 190 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 ZSCAN4Q8NAM6 433 aaPredicted RBP16.67■□□□□ 0.26
HDAC4-209ENST00000487617 CHST6Q9GZX3 395 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 HMG20AQ9NP66 347 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 DIMT1Q9UNQ2 313 aaKnown RBP16.67■□□□□ 0.26
HDAC4-209ENST00000487617 GSTK1Q9Y2Q3 226 aa16.67■□□□□ 0.26
HDAC4-209ENST00000487617 EXOSC1Q9Y3B2 195 aaKnown RBP16.67■□□□□ 0.26
HDAC4-209ENST00000487617 KDM4BO94953 1096 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 ALX3O95076 343 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 NDUFA7O95182 113 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 CAPGP40121 348 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 SOX2P48431 317 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 DLX6P56179 175 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 RELBQ01201 579 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 CDK5R1Q15078 307 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 ZNF782Q6ZMW2 699 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-209ENST00000487617 SAXO1Q8IYX7 474 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 OR52N4Q8NGI2 321 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 SGMS2Q8NHU3 365 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 C17orf50Q8WW18 174 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 TMEM80Q96HE8 168 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 BEX1Q9HBH7 125 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 CHCHD3Q9NX63 227 aaKnown RBP16.66■□□□□ 0.26
HDAC4-209ENST00000487617 MMP24Q9Y5R2 645 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 HSPE1-MOB4S4R3N1 261 aa16.66■□□□□ 0.26
HDAC4-209ENST00000487617 A0A1B0GUS0 222 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 C17orf98A8MV24 154 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 SH2D1BO14796 132 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 CASQ2O14958 399 aaPredicted RBP16.65■□□□□ 0.26
HDAC4-209ENST00000487617 PSPNO60542 156 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 ZNF728P0DKX0 622 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 TMEM225BP0DP42 221 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 RAB3AP20336 220 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 MEF2CQ06413 473 aaPredicted RBP16.65■□□□□ 0.26
HDAC4-209ENST00000487617 MED21Q13503 144 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 KISS1Q15726 138 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 CRIP3Q6Q6R5 217 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 GDPGP1Q6ZNW5 385 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 C8orf59Q8N0T1 100 aaPredicted RBP16.65■□□□□ 0.26
HDAC4-209ENST00000487617 BEND2Q8NDZ0 799 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 PPP1R35Q8TAP8 253 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 GPR148Q8TDV2 347 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 RGP1Q92546 391 aaPredicted RBP16.65■□□□□ 0.26
HDAC4-209ENST00000487617 RHOFQ9HBH0 211 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 EXOSC4Q9NPD3 245 aaKnown RBP16.65■□□□□ 0.26
HDAC4-209ENST00000487617 BABAM2Q9NXR7 383 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 CLEC2DQ9UHP7 191 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 VPREB3Q9UKI3 123 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 PCDHGB5Q9Y5G0 923 aa16.65■□□□□ 0.26
HDAC4-209ENST00000487617 hADV38S2A0JD32 116 aa16.64■□□□□ 0.25
HDAC4-209ENST00000487617 SIRPB1O00241 398 aa16.64■□□□□ 0.25
HDAC4-209ENST00000487617 GNAO1P09471 354 aa16.64■□□□□ 0.25
HDAC4-209ENST00000487617 BMXP51813 675 aa16.64■□□□□ 0.25
HDAC4-209ENST00000487617 TPRX1Q8N7U7 411 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms