RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 MOB3AQ96BX8 217 aa10.6□□□□□ -0.71
COL3A1-206ENST00000487010 BOD1Q96IK1 185 aa10.6□□□□□ -0.71
COL3A1-206ENST00000487010 RASL10BQ96S79 203 aa10.6□□□□□ -0.71
COL3A1-206ENST00000487010 EML6Q6ZMW3 1958 aa10.6□□□□□ -0.71
COL3A1-206ENST00000487010 PHF1O43189 567 aaPredicted RBP10.59□□□□□ -0.71
COL3A1-206ENST00000487010 ASCL1P50553 236 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 AFF3P51826 1226 aaKnown RBP10.59□□□□□ -0.71
COL3A1-206ENST00000487010 CCL20P78556 96 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 NCMAPQ5T1S8 102 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 BRICD5Q6PL45 260 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 TMEM123Q8N131 208 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 SLC25A45Q8N413 288 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 CADM4Q8NFZ8 388 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 OR10AD1Q8NGE0 317 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 OR2AE1Q8NHA4 323 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 C11orf1Q9H5F2 150 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 RTTNQ86VV8 2226 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 MED12Q93074 2177 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 IGHV3-15A0A0B4J1V0 119 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 FAM221AA4D161 298 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 RBFOX3A6NFN3 312 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 GEMIN2O14893 280 aaKnown RBP10.59□□□□□ -0.71
COL3A1-206ENST00000487010 GPR37O15354 613 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 PNLIPP16233 465 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 HTR5AP47898 357 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 CNN3Q15417 329 aaKnown RBP10.59□□□□□ -0.71
COL3A1-206ENST00000487010 PIGYQ3MUY2 71 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 HIKESHIQ53FT3 197 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 PRAMEF20Q5VT98 475 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 OR2C3Q8N628 320 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 SLC35G3Q8N808 338 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 CCDC71LQ8N9Z2 235 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 OR2G3Q8NGZ4 309 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 AKR7LQ8NHP1 331 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 MUCL1Q96DR8 90 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 TP53RKQ96S44 253 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 BCO1Q9HAY6 547 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 ZNF286AQ9HBT8 521 aa10.59□□□□□ -0.71
COL3A1-206ENST00000487010 CHCHD2Q9Y6H1 151 aaPredicted RBP10.59□□□□□ -0.71
COL3A1-206ENST00000487010 FAM24AA6NFZ4 105 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 NPIPA2E9PIF3 369 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 NPIPA3F8WFD2 350 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 FBP1P09467 338 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 HOXA5P20719 270 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 CRYGSP22914 178 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 RBP2P50120 134 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF266Q14584 549 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 SPSB3Q6PJ21 355 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 FBXL14Q8N1E6 418 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 OR8G5Q8NG78 346 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 MR1Q95460 341 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 OR6C1Q96RD1 312 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 GGACTQ9BVM4 153 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 TOLLIPQ9H0E2 274 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 RFNGQ9Y644 331 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 SPAG17Q6Q759 2223 aa10.58□□□□□ -0.72
COL3A1-206ENST00000487010 IGKV1-12A0A0C4DH73 117 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 IGSF23A1L1A6 192 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 PITX3O75364 302 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 SCRG1O75711 98 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 CDS2O95674 445 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 IGKV1D-12P01611 117 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 AADACP22760 399 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 ATP6V0CP27449 155 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 RPS10P46783 165 aaKnown RBP10.57□□□□□ -0.72
COL3A1-206ENST00000487010 NOVA1P51513 510 aaKnown RBP10.57□□□□□ -0.72
COL3A1-206ENST00000487010 RAB2AP61019 212 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 KIAA0141Q14154 515 aaPredicted RBP10.57□□□□□ -0.72
COL3A1-206ENST00000487010 FAM27BQ5VT28 67 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 MEX3BQ6ZN04 569 aaKnown RBP10.57□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF574Q6ZN55 896 aaPredicted RBP10.57□□□□□ -0.72
COL3A1-206ENST00000487010 LHFPL2Q6ZUX7 228 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 OSR2Q8N2R0 312 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF837Q96EG3 531 aaPredicted RBP10.57□□□□□ -0.72
COL3A1-206ENST00000487010 BORCS8Q96FH0 119 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 UCN2Q96RP3 112 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 ABHD14AQ9BUJ0 271 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 DEFB126Q9BYW3 111 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 ULBP2Q9BZM5 246 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 BCL2L14Q9BZR8 327 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 FOXD3Q9UJU5 478 aaPredicted RBP10.57□□□□□ -0.72
COL3A1-206ENST00000487010 A0A087WZY1 265 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 TRBV23-1A0A0A0MS06 115 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 C3orf85A0A1B0GTC6 90 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 NKX2-6A6NCS4 301 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 TRDCB7Z8K6 153 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 H3BQ15 152 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 MPPED1O15442 326 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 VAMP5O95183 116 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 ITGA3P26006 1051 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 HERV-K104P61576 105 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 MAML2Q8IZL2 1156 aaPredicted RBP10.57□□□□□ -0.72
COL3A1-206ENST00000487010 ZFP62Q8NB50 900 aaPredicted RBP10.57□□□□□ -0.72
COL3A1-206ENST00000487010 OR14L1PQ8NHC6 308 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 INTS12Q96CB8 462 aaKnown RBP10.57□□□□□ -0.72
COL3A1-206ENST00000487010 SPSB2Q99619 263 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 PCED1AQ9H1Q7 454 aa10.57□□□□□ -0.72
COL3A1-206ENST00000487010 UNKLQ9H9P5 680 aaKnown RBP10.57□□□□□ -0.72
COL3A1-206ENST00000487010 BTBD17A6NE02 478 aa10.56□□□□□ -0.72
COL3A1-206ENST00000487010 ZNF724A8MTY0 619 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms