RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 A0A1W2PPZ6 126 aa15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 MT-CO3P00414 261 aa15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 COX5BP10606 129 aa15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 PMELP40967 661 aa15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 PIGPP57054 158 aa15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 C9orf135Q5VTT2 229 aa15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 LINC00696Q6ZRV3 163 aa15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 TMEM251Q8N6I4 163 aa15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 RNF141Q8WVD5 230 aa15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 TOMM40LQ969M1 308 aa15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 MARS2Q96GW9 593 aaKnown RBP15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 CNTNAP3BQ96NU0 1288 aa15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 CNTNAP3Q9BZ76 1288 aa15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 LDAHQ9H6V9 325 aa15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 RNF122Q9H9V4 155 aa15.52■□□□□ 0.07
PDLIM7-207ENST00000486828 RAB19A4D1S5 217 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 ZNF724A8MTY0 619 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 IFNA21P01568 189 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM219AQ8IW50 185 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 Q8NFD4 153 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 BPIFCQ8NFQ6 507 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 OR56B2PQ8NGI1 322 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 REPIN1Q9BWE0 567 aaKnown RBP15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 C12orf4Q9NQ89 552 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 TUBD1Q9UJT1 453 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 KCNIP3Q9Y2W7 256 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 CNOT1A5YKK6 2376 aaKnown RBP15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM221AA4D161 298 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 APOC3P02656 99 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 CD79AP11912 226 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 FUT3P21217 361 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 PLGLB1Q02325 96 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 PXDC1Q5TGL8 231 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 GGNBP1Q5YKI7 109 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 TMEM211Q6ICI0 200 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 SLC25A26Q70HW3 274 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 TMED6Q8WW62 240 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 GALNT14Q96FL9 552 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 NAA60Q9H7X0 242 aa15.51■□□□□ 0.07
PDLIM7-207ENST00000486828 PQLC2LA1A4F0 135 aa15.5■□□□□ 0.07
PDLIM7-207ENST00000486828 TAAR5O14804 337 aa15.5■□□□□ 0.07
PDLIM7-207ENST00000486828 HLA-HP01893 362 aa15.5■□□□□ 0.07
PDLIM7-207ENST00000486828 HKR1P10072 659 aa15.5■□□□□ 0.07
PDLIM7-207ENST00000486828 CCNOP22674 350 aa15.5■□□□□ 0.07
PDLIM7-207ENST00000486828 FOXG1P55316 489 aaPredicted RBP15.5■□□□□ 0.07
PDLIM7-207ENST00000486828 DAZAP2Q15038 168 aaPredicted RBP15.5■□□□□ 0.07
PDLIM7-207ENST00000486828 PDCD1Q15116 288 aa15.5■□□□□ 0.07
PDLIM7-207ENST00000486828 ABCA11PQ4W5N1 156 aa15.5■□□□□ 0.07
PDLIM7-207ENST00000486828 MRPL24Q96A35 216 aaKnown RBP15.5■□□□□ 0.07
PDLIM7-207ENST00000486828 PAPOLGQ9BWT3 736 aaKnown RBP15.5■□□□□ 0.07
PDLIM7-207ENST00000486828 PRRG4Q9BZD6 226 aa15.5■□□□□ 0.07
PDLIM7-207ENST00000486828 PCNX2A6NKB5 2137 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 C5orf49A4QMS7 147 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM90A10PA6NDY2 464 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM90A18PA6NE21 464 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM90A16PA6NEW6 464 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM90A20PA6NIJ5 464 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM90A8PA6NJQ4 464 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM90A7PA6NKC0 464 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM90A22PA8MWA6 464 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM90A12PA8MX19 464 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM90A5PA8MXJ8 464 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM90A23PA8MXZ1 464 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM90A15PP0C7V4 464 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM90A13PP0C7W8 464 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM90A14PP0C7W9 464 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM90A24PP0C7X0 464 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FCGR2CP31995 323 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 NPBWR2P48146 333 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FXYD4P59646 89 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 PRDX4Q13162 271 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 TMEM187Q14656 261 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 RTN4IP1Q8WWV3 396 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 APH1AQ96BI3 265 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 ZNF442Q9H7R0 627 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 ZNF503-AS2A6NEH8 195 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 GFRA3O60609 400 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 DEDDO75618 318 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 OR7C1O76099 320 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 ZNF205O95201 554 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM157CP0CG43 387 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 UCP3P55916 312 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 EIF5AP63241 154 aaKnown RBP15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 SMCO1Q147U7 214 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 Q6ZPA2 131 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 MRPL21Q7Z2W9 205 aaKnown RBP15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 FOXRED2Q8IWF2 684 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 BOLLQ8N9W6 283 aaKnown RBP15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 SPERTQ8NA61 448 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 APOBEC3DQ96AK3 386 aaPredicted RBP15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 MOB3AQ96BX8 217 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 IL17BQ9UHF5 180 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 STARD10Q9Y365 291 aa15.49■□□□□ 0.07
PDLIM7-207ENST00000486828 TSPAN4O14817 238 aa15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 SS18L1O75177 396 aaPredicted RBP15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 CST4P01036 141 aa15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 SP1P08047 785 aa15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 OR5AC1P0C628 307 aa15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 CCL2P13500 99 aa15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 GLP1RP43220 463 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms