RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 PLRG1O43660 514 aaKnown RBP9.28□□□□□ -0.92
CCDC171-208ENST00000486641 KLF8O95600 359 aaPredicted RBP9.28□□□□□ -0.92
CCDC171-208ENST00000486641 TM4SF4P48230 202 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 PNRC1Q12796 327 aaPredicted RBP9.28□□□□□ -0.92
CCDC171-208ENST00000486641 CLN3Q13286 438 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 PRTGQ2VWP7 1150 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 COA6Q5JTJ3 125 aaKnown RBP9.28□□□□□ -0.92
CCDC171-208ENST00000486641 DCAF10Q5QP82 559 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 ODF3L1Q8IXM7 274 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 CMTM1Q8IZ96 169 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 LGI3Q8N145 548 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 SUMF1Q8NBK3 374 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 SLC38A9Q8NBW4 561 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 LIN37Q96GY3 246 aaPredicted RBP9.28□□□□□ -0.92
CCDC171-208ENST00000486641 OR8D2Q9GZM6 311 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 ELL3Q9HB65 397 aaPredicted RBP9.28□□□□□ -0.92
CCDC171-208ENST00000486641 RRAGCQ9HB90 399 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 SLC2A9Q9NRM0 540 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 GLRX2Q9NS18 164 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 VAX2Q9UIW0 290 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 LHFPL6Q9Y693 200 aa9.28□□□□□ -0.92
CCDC171-208ENST00000486641 NKX2-6A6NCS4 301 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 A6NNC1 897 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 E9PLN8 166 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 PHF1O43189 567 aaPredicted RBP9.27□□□□□ -0.92
CCDC171-208ENST00000486641 OPRM1P35372 400 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 DYNLT3P51808 116 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 LBX1P52954 281 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 TLE4Q04727 773 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 MPV17LQ2QL34 196 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 WDR25Q64LD2 544 aaPredicted RBP9.27□□□□□ -0.92
CCDC171-208ENST00000486641 TMEM252Q8N6L7 170 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 ADIPOR1Q96A54 375 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 MMABQ96EY8 250 aaPredicted RBP9.27□□□□□ -0.92
CCDC171-208ENST00000486641 FAAP24Q9BTP7 215 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 TM2D1Q9BX74 207 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 TBL1XR1Q9BZK7 514 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 PLEKHF2Q9H8W4 249 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 GAB2Q9UQC2 676 aa9.27□□□□□ -0.92
CCDC171-208ENST00000486641 SZT2Q5T011 3432 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 C5orf63A6NC05 138 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 FRG2CA6NGY1 282 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 CA11O75493 328 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 CST7O76096 145 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 HBE1P02100 147 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 FGF5P12034 268 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 IL12BP29460 328 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 GALNSP34059 522 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 DAP3P51398 398 aaKnown RBP9.27□□□□□ -0.93
CCDC171-208ENST00000486641 HSD17B7P56937 341 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 HERPUD1Q15011 391 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 ARL6IP1Q15041 203 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 PPA1Q15181 289 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 MEX3BQ6ZN04 569 aaKnown RBP9.27□□□□□ -0.93
CCDC171-208ENST00000486641 FAM57BQ71RH2 274 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 TMEM217Q8N7C4 229 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 SLC46A1Q96NT5 459 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 MAGT1Q9H0U3 335 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 NECAP2Q9NVZ3 263 aa9.27□□□□□ -0.93
CCDC171-208ENST00000486641 ZFP92A6NM28 416 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 ALG1L2C9J202 215 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 IFNL4K9M1U5 179 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 ETV2O00321 342 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-208ENST00000486641 METTL15P1P0C7V9 234 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 GZMHP20718 246 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 CDAP32320 146 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 BIDP55957 195 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 ZP4Q12836 540 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 PMS2P11Q13670 270 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF66Q6ZN08 573 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 GRINAQ7Z429 371 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 FAM185AQ8N0U4 392 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 ARL6IP6Q8N6S5 226 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 GNPNAT1Q96EK6 184 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-208ENST00000486641 TP53RKQ96S44 253 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 MOB1AQ9H8S9 216 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 ZNF581Q9P0T4 197 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 MYOTQ9UBF9 498 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 MYO7BQ6PIF6 2116 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 BLACEA4D250 179 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 SHISA7A6NL88 538 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 SSSCA1O60232 199 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 SEMA4FO95754 770 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 PFN1P07737 140 aaKnown RBP9.26□□□□□ -0.93
CCDC171-208ENST00000486641 FCGR2AP12318 317 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 CCL1P22362 96 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 NKX2-1P43699 371 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-208ENST00000486641 PDLIM4P50479 330 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 IQCJQ1A5X6 159 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 C1orf189Q5VU69 101 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 RTL6Q6ICC9 239 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 BTNL3Q6UXE8 466 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 H1FNTQ75WM6 255 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-208ENST00000486641 DOK3Q7L591 496 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 OOSP2Q86WS3 158 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 MRPL41Q8IXM3 137 aaKnown RBP9.26□□□□□ -0.93
CCDC171-208ENST00000486641 MAML2Q8IZL2 1156 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-208ENST00000486641 D2HGDHQ8N465 521 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 NECAP1Q8NC96 275 aa9.26□□□□□ -0.93
CCDC171-208ENST00000486641 BMFQ96LC9 184 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms