RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 CLRN3Q8NCR9 226 aa7.82□□□□□ -1.16
COL12A1-208ENST00000486533 OR52N4Q8NGI2 321 aa7.82□□□□□ -1.16
COL12A1-208ENST00000486533 PP6455Q8WZ26 134 aa7.82□□□□□ -1.16
COL12A1-208ENST00000486533 DCUN1D4Q92564 292 aa7.82□□□□□ -1.16
COL12A1-208ENST00000486533 NARS2Q96I59 477 aaKnown RBP7.82□□□□□ -1.16
COL12A1-208ENST00000486533 UCN2Q96RP3 112 aa7.82□□□□□ -1.16
COL12A1-208ENST00000486533 GAL3ST1Q99999 423 aa7.82□□□□□ -1.16
COL12A1-208ENST00000486533 PIGQQ9BRB3 760 aa7.82□□□□□ -1.16
COL12A1-208ENST00000486533 NAA11Q9BSU3 229 aaPredicted RBP7.82□□□□□ -1.16
COL12A1-208ENST00000486533 ZNF416Q9BWM5 594 aa7.82□□□□□ -1.16
COL12A1-208ENST00000486533 NKX6-2Q9C056 277 aaPredicted RBP7.82□□□□□ -1.16
COL12A1-208ENST00000486533 KCNK15Q9H427 330 aa7.82□□□□□ -1.16
COL12A1-208ENST00000486533 JKAMPQ9P055 326 aa7.82□□□□□ -1.16
COL12A1-208ENST00000486533 NDRG3Q9UGV2 375 aa7.82□□□□□ -1.16
COL12A1-208ENST00000486533 LOC100996750A0A140TA64 210 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 F8VVB4 439 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 F8VWA3 439 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 SULT2B1O00204 365 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 ABCD4O14678 606 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 CDC14BO60729 498 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 EIF1BO60739 113 aaKnown RBP7.81□□□□□ -1.16
COL12A1-208ENST00000486533 MPIG6BO95866 241 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 AKR1C4P17516 323 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 ALDH3B1P43353 468 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 DEFA5Q01523 94 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 PLPPR5Q32ZL2 321 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 GFOD2Q3B7J2 385 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 ELP2Q6IA86 826 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 PRSS54Q6PEW0 395 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 SLC25A47Q6Q0C1 308 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 GLIPR1L1Q6UWM5 242 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 DRAM2Q6UX65 266 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 ABHD12BQ7Z5M8 362 aaPredicted RBP7.81□□□□□ -1.16
COL12A1-208ENST00000486533 BAP18Q8IXM2 172 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 ZNF283Q8N7M2 679 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 SLC30A7Q8NEW0 376 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 CASTOR1Q8WTX7 329 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 NUDCD2Q8WVJ2 157 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 EMG1Q92979 244 aaKnown RBP7.81□□□□□ -1.16
COL12A1-208ENST00000486533 NINJ1Q92982 152 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 SAT2Q96F10 170 aaPredicted RBP7.81□□□□□ -1.16
COL12A1-208ENST00000486533 PIK3IP1Q96FE7 263 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 TSNAXQ99598 290 aaKnown RBP7.81□□□□□ -1.16
COL12A1-208ENST00000486533 MRPL13Q9BYD1 178 aaKnown RBP7.81□□□□□ -1.16
COL12A1-208ENST00000486533 KRTAP4-6Q9BYQ5 205 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 SELENOIQ9C0D9 397 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 OR10A2Q9H208 303 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 SEC61A2Q9H9S3 476 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 GPR160Q9UJ42 338 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 EDARQ9UNE0 448 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 VDAC3Q9Y277 283 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 RHBDD3Q9Y3P4 386 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 FLVCR1Q9Y5Y0 555 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 NF1P21359 2839 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 PRRC2AP48634 2157 aaKnown RBP7.81□□□□□ -1.16
COL12A1-208ENST00000486533 VPS13CQ709C8 3753 aa7.81□□□□□ -1.16
COL12A1-208ENST00000486533 A0A0U1RQV5 110 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 C13orf42A0A1B0GVH6 325 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 FAM221AA4D161 298 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 DBX1A6NMT0 343 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 GJE1A6NN92 205 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 DHRS7CA6NNS2 312 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 SHISA8B8ZZ34 492 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 H7C2Y5 167 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 LINC01387J3KSC0 135 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 FGF16O43320 207 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 TNFSF13O75888 250 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 SNAPINO95295 136 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 MPZL1O95297 269 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 IFNA21P01568 189 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 PGA4P0DJD7 388 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 PGA3P0DJD8 388 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 LYL1P12980 280 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 HLA-DOBP13765 273 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 CPT2P23786 658 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 SERPINF1P36955 418 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 ZNF84P51523 738 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 SUCLG1P53597 346 aaKnown RBP7.8□□□□□ -1.16
COL12A1-208ENST00000486533 ATP1B3P54709 279 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 BLOC1S1P78537 153 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 UNC119Q13432 240 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 DAZAP2Q15038 168 aaPredicted RBP7.8□□□□□ -1.16
COL12A1-208ENST00000486533 MOGAT2Q3SYC2 334 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 LRRC37A5PQ49AS3 106 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 OR2A2Q6IF42 318 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 CORO6Q6QEF8 472 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 GJC3Q8NFK1 279 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 OR4S1Q8NGB4 309 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 PPP1R14AQ96A00 147 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 ZNF524Q96C55 264 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 ADAT3Q96EY9 351 aaPredicted RBP7.8□□□□□ -1.16
COL12A1-208ENST00000486533 PGAM5Q96HS1 289 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 LPAR5Q9H1C0 372 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 MMP26Q9NRE1 261 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 C1orf123Q9NWV4 160 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 MED29Q9NX70 200 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 GPR132Q9UNW8 380 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 POMT1Q9Y6A1 747 aa7.8□□□□□ -1.16
COL12A1-208ENST00000486533 FLNAP21333 2647 aaKnown RBP7.8□□□□□ -1.16
COL12A1-208ENST00000486533 ACANP16112 2415 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms