RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 PYCR1P32322 319 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 ZNF121P58317 390 aaPredicted RBP6.29□□□□□ -1.4
XRN1-212ENST00000486211 SRSF3P84103 164 aaKnown RBP6.29□□□□□ -1.4
XRN1-212ENST00000486211 EWSR1Q01844 656 aaKnown RBP eCLIP6.29□□□□□ -1.4
XRN1-212ENST00000486211 HNF4GQ14541 408 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 TAF13Q15543 124 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 CEACAM21Q3KPI0 293 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 FGD3Q5JSP0 725 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 CEP78Q5JTW2 689 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 LINC00336Q6ZUF6 198 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 GDPD3Q7L5L3 318 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 TIGD4Q8IY51 512 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 OR8H2Q8N162 312 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 BATF2Q8N1L9 274 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 ITFG2Q969R8 447 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 CREB3L1Q96BA8 519 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 RSRC1Q96IZ7 334 aaKnown RBP6.29□□□□□ -1.4
XRN1-212ENST00000486211 ERMAPQ96PL5 475 aaPredicted RBP6.29□□□□□ -1.4
XRN1-212ENST00000486211 TMED9Q9BVK6 235 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 FNDC11Q9BVV2 318 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 ALX4Q9H161 411 aaPredicted RBP6.29□□□□□ -1.4
XRN1-212ENST00000486211 OR51J1Q9H342 316 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 RGCCQ9H4X1 137 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 TUBA4BQ9H853 241 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 ACTR3BQ9P1U1 418 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 DNAJB9Q9UBS3 223 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 SLC22A13Q9Y226 551 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 VSIG4Q9Y279 399 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 COMMD3-BMI1R4GMX3 469 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 DNAH17Q9UFH2 4485 aa6.29□□□□□ -1.4
XRN1-212ENST00000486211 PKD1P98161 4303 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 ARPC3O15145 178 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 NXPH2O95156 264 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 SERPINA1P01009 418 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 OMPP47874 163 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 ERVK11-1P61568 191 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 GRB2P62993 217 aaKnown RBP6.28□□□□□ -1.4
XRN1-212ENST00000486211 HES1Q14469 280 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 EDDM3AQ14507 147 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 CYBRD1Q53TN4 286 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 OR52W1Q6IF63 320 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 HEPN1Q6WQI6 88 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 TGIF2LXQ8IUE1 241 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 MREGQ8N565 214 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 Q8N9W7 124 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 OR5A2Q8NGI9 324 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 LZICQ8WZA0 190 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 TMEM106AQ96A25 262 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 DHRS1Q96LJ7 313 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 KCTD7Q96MP8 289 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 HIST1H2AAQ96QV6 131 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 OR4C12Q96R67 309 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 HSPB9Q9BQS6 159 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 PARD6BQ9BYG5 372 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 OR10A2Q9H208 303 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 VIPAS39Q9H9C1 493 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 LIN7CQ9NUP9 197 aaKnown RBP6.28□□□□□ -1.4
XRN1-212ENST00000486211 GFOD1Q9NXC2 390 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 ZNF580Q9UK33 172 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 TMEM5Q9Y2B1 443 aa6.28□□□□□ -1.4
XRN1-212ENST00000486211 IGHV4OR15-8A0A075B7B6 117 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 A0A087WW49 117 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 A0A087X0M5 115 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 A0A1B0GX30 115 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 DHRS12A0PJE2 317 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 OR5B21A6NL26 309 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 LINC01619G3V211 115 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 J3QT63 122 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 RRP9O43818 475 aaKnown RBP6.27□□□□□ -1.41
XRN1-212ENST00000486211 IGKV1D-33P01593 117 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 IGKV1-33P01594 117 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 IGF1P05019 195 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 SPARCP09486 303 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 VDAC1P21796 283 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 CDK2P24941 298 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 PPIFP30405 207 aaKnown RBP6.27□□□□□ -1.41
XRN1-212ENST00000486211 IFNA8P32881 189 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 STX1BP61266 288 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 PITPNAQ00169 270 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 EBI3Q14213 229 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 DIAPH2-AS1Q14236 149 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 PGAM4Q8N0Y7 254 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 Q8N6K4 173 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 MNS1Q8NEH6 495 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 OR52N4Q8NGI2 321 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 TOMM40LQ969M1 308 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 EAF1Q96JC9 268 aaPredicted RBP6.27□□□□□ -1.41
XRN1-212ENST00000486211 SNX22Q96L94 193 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 PCDHB16Q9NRJ7 776 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 DNAJC27Q9NZQ0 273 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 CD300AQ9UGN4 299 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 STUB1Q9UNE7 303 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 KLK5Q9Y337 293 aaPredicted RBP6.27□□□□□ -1.41
XRN1-212ENST00000486211 UBE2J1Q9Y385 318 aaPredicted RBP6.27□□□□□ -1.41
XRN1-212ENST00000486211 UBR4Q5T4S7 5183 aa6.27□□□□□ -1.41
XRN1-212ENST00000486211 UNC119BA6NIH7 251 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 ZNF593O00488 134 aaPredicted RBP6.26□□□□□ -1.41
XRN1-212ENST00000486211 TOR1AO14656 332 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 FASP25445 335 aa6.26□□□□□ -1.41
XRN1-212ENST00000486211 HSD11B1P28845 292 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms