RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 ZNF146Q15072 292 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 ZSCAN26Q16670 478 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 LPCAT4Q643R3 524 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 DHRS7BQ6IAN0 325 aaPredicted RBP14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 Q6ZSV7 163 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 ZNF555Q8NEP9 628 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 APH1BQ8WW43 257 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 SSX3Q99909 188 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 ZCCHC4Q9H5U6 513 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 C16orf95Q9H693 158 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 NEK6Q9HC98 313 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 SMPD3Q9NY59 655 aaPredicted RBP14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 IL36RNQ9UBH0 155 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 GLS2Q9UI32 602 aa14.98□□□□□ -0.01
PRPF40A-209ENST00000486100 E9PI62 339 aa14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 TSPAN9O75954 239 aa14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 ZFPL1O95159 310 aa14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 COX7A1P24310 79 aa14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 PEX2P28328 305 aa14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 GBX2P52951 348 aaPredicted RBP14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 LGALS4P56470 323 aa14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 MEF2CQ06413 473 aaPredicted RBP14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 SRSF4Q08170 494 aaKnown RBP14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 AANATQ16613 207 aa14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 SPIN3Q5JUX0 258 aa14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 OR52N4Q8NGI2 321 aa14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 OR13C9Q8NGT0 318 aa14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 HAVCR2Q8TDQ0 301 aa14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 STMN2Q93045 179 aa14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 CITED1Q99966 193 aa14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 HMG20AQ9NP66 347 aa14.97□□□□□ -0.01
PRPF40A-209ENST00000486100 TMEM212A6NML5 194 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 H3BUX3 64 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 WBP4O75554 376 aaKnown RBP14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 CLPXO76031 633 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 ALX3O95076 343 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 RBP4P02753 201 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 CCDC159P0C7I6 412 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 CALCBP10092 127 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 PRKACAP17612 351 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 GABRR1P24046 479 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 DUSP1P28562 367 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 BMXP51813 675 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 GRK1Q15835 563 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 ZNF782Q6ZMW2 699 aaPredicted RBP14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 SERPINA12Q8IW75 414 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 OR5D14Q8NGL3 314 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 OR5AK2Q8NH90 309 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 PPP1R35Q8TAP8 253 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 RFT1Q96AA3 541 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 SPACA5Q96QH8 159 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 JAM3Q9BX67 310 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 COMMD4Q9H0A8 199 aa14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 FGF20Q9NP95 211 aaPredicted RBP14.96□□□□□ -0.01
PRPF40A-209ENST00000486100 IGKV1-12A0A0C4DH73 117 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 hADV38S2A0JD32 116 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 FAM90A8PA6NJQ4 464 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 PSPNO60542 156 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 KDM4BO94953 1096 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 IGKV1D-12P01611 117 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 LIMS3P0CW19 117 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 LIMS4P0CW20 117 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 PROK1P58294 105 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 KRTAP10-3P60369 221 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 EDDM3AQ14507 147 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 SMN1Q16637 294 aaKnown RBP14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 LRRC75BQ2VPJ9 315 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 BRICD5Q6PL45 260 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 RNF144BQ7Z419 303 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 SAXO1Q8IYX7 474 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 PARP16Q8N5Y8 322 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 OR13D1Q8NGV5 346 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 ZNF714Q96N38 554 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 PDCD1LG2Q9BQ51 273 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 CHST6Q9GZX3 395 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 PPA2Q9H2U2 334 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 RHOFQ9HBH0 211 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 TRRAPQ9Y4A5 3859 aa14.95□□□□□ -0.02
PRPF40A-209ENST00000486100 MEX3AA1L020 520 aaKnown RBP14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 SH2D1BO14796 132 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 MGST3O14880 152 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 IGHV1-8P0DP01 117 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 DCKP27707 260 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 ERP29P30040 261 aaKnown RBP14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 SNU13P55769 128 aaKnown RBP14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 SLC35E4Q6ICL7 350 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 CRIP3Q6Q6R5 217 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 TREML4Q6UXN2 200 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 TCF23Q7RTU1 214 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 TPRX1Q8N7U7 411 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 OR4S1Q8NGB4 309 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 OR11H6Q8NGC7 330 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 OR5D18Q8NGL1 313 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 DHDHQ9UQ10 334 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 GSTK1Q9Y2Q3 226 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 LINC00312Q9Y6C7 94 aa14.94□□□□□ -0.02
PRPF40A-209ENST00000486100 SULT1B1O43704 296 aa14.93□□□□□ -0.02
PRPF40A-209ENST00000486100 LMO1P25800 156 aa14.93□□□□□ -0.02
PRPF40A-209ENST00000486100 PAX6P26367 422 aa14.93□□□□□ -0.02
PRPF40A-209ENST00000486100 GTF2A1P52655 376 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms