RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 DUX4L5P0CJ88 424 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 DUX4L6P0CJ89 424 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 DUX4L7P0CJ90 424 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 PGA5P0DJD9 388 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 ZNF44P15621 663 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 PAX1P15863 534 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 RPS2P15880 293 aaKnown RBP4.71□□□□□ -1.66
COPS3-208ENST00000486032 GALP22466 123 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 HTR2CP28335 458 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 FGF9P31371 208 aaPredicted RBP4.71□□□□□ -1.66
COPS3-208ENST00000486032 RPS19P39019 145 aaKnown RBP4.71□□□□□ -1.66
COPS3-208ENST00000486032 NR4A2P43354 598 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 MTNR1BP49286 362 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 CAPZA1P52907 286 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 TMEM33P57088 247 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 DSCR9P59020 149 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 ZP1P60852 638 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 IKZF1Q13422 519 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 ZMYND11Q15326 602 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 MICBQ29980 383 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 FAM76BQ5HYJ3 339 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 SHEQ5VZ18 495 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 ZNF529Q6P280 563 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 CRIP3Q6Q6R5 217 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 DUX4L9Q6RFH8 374 aaPredicted RBP4.71□□□□□ -1.66
COPS3-208ENST00000486032 LYPD2Q6UXB3 125 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 ACP7Q6ZNF0 438 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 GDPGP1Q6ZNW5 385 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 SLC16A12Q6ZSM3 486 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 FAM58AQ8N1B3 248 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 CIARTQ8N365 385 aaPredicted RBP4.71□□□□□ -1.66
COPS3-208ENST00000486032 OR51D1Q8NGF3 324 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 OR10Z1Q8NGY1 313 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 CLDND2Q8NHS1 167 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 NDNFQ8TB73 568 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 Q8TCH9 128 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 C10orf105Q8TEF2 133 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 FOXRED1Q96CU9 486 aaPredicted RBP4.71□□□□□ -1.66
COPS3-208ENST00000486032 FOXC2Q99958 501 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 TMEM246Q9BRR3 403 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 TLNRD1Q9H1K6 362 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 LPAR2Q9HBW0 351 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 MYOZ1Q9NP98 299 aaPredicted RBP4.71□□□□□ -1.66
COPS3-208ENST00000486032 NLKQ9UBE8 527 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 IL36RNQ9UBH0 155 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 DUX4Q9UBX2 424 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 TANC2Q9HCD6 1990 aa4.71□□□□□ -1.66
COPS3-208ENST00000486032 DPPA5A6NC42 116 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 NKX6-3A6NJ46 265 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 OR2AT4A6NND4 320 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 CEACAM18A8MTB9 384 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 NOTOA8MTQ0 251 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 H7C1Q1 480 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 IFNL4K9M1U5 179 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 NDUFS8O00217 210 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 SIRPB1O00241 398 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 SLC17A2O00624 439 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 HSPB6O14558 160 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 TMPRSS2O15393 492 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 KDM4BO94953 1096 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 GABARAPO95166 117 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 PAHP00439 452 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 IGHV2-70P01814 119 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 PSG2P11465 335 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 SELLP14151 372 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 ARSBP15848 533 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 SLC25A16P16260 332 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 NDUFB7P17568 137 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 USF1P22415 310 aaPredicted RBP4.7□□□□□ -1.66
COPS3-208ENST00000486032 GABRR1P24046 479 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 MPZP25189 248 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 MDH2P40926 338 aaKnown RBP4.7□□□□□ -1.66
COPS3-208ENST00000486032 PSMD7P51665 324 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 MRPS11P82912 194 aaKnown RBP4.7□□□□□ -1.66
COPS3-208ENST00000486032 BLMHQ13867 455 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 SPCS2Q15005 226 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 DGUOKQ16854 277 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 ZNF181Q2M3W8 571 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 SMIM21Q3B7S5 101 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 PIGYQ3MUY2 71 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 ZNF404Q494X3 552 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 C1orf100Q5SVJ3 147 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 ATAD3CQ5T2N8 411 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 SFXN4Q6P4A7 337 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 FIP1L1Q6UN15 594 aaKnown RBP4.7□□□□□ -1.66
COPS3-208ENST00000486032 USP43Q70EL4 1123 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 TPRA1Q86W33 373 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 NR2C2APQ86WQ0 139 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 FAM90A1Q86YD7 464 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 OSR2Q8N2R0 312 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 MUC20Q8N307 709 aaPredicted RBP4.7□□□□□ -1.66
COPS3-208ENST00000486032 FGFRL1Q8N441 504 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 SPICQ8N5J4 248 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 FAM216BQ8N7L0 139 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 ASCC1Q8N9N2 400 aaKnown RBP4.7□□□□□ -1.66
COPS3-208ENST00000486032 ZSCAN4Q8NAM6 433 aaPredicted RBP4.7□□□□□ -1.66
COPS3-208ENST00000486032 TMEM104Q8NE00 496 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 TMEM185AQ8NFB2 350 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 PXT1Q8NFP0 134 aa4.7□□□□□ -1.66
COPS3-208ENST00000486032 OR8B3Q8NGG8 313 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms