RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 LINC00312Q9Y6C7 94 aa11.12□□□□□ -0.63
SCAF4-206ENST00000485790 SNTNA6NMZ2 147 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 M0R129 80 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 MGST3O14880 152 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 CHST1O43916 411 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 HAND1O96004 215 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 RPSAP08865 295 aaKnown RBP11.11□□□□□ -0.63
SCAF4-206ENST00000485790 ZNF20P17024 532 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 AZGP1P25311 298 aaKnown RBP11.11□□□□□ -0.63
SCAF4-206ENST00000485790 HTR1DP28221 377 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 BRS3P32247 399 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 NSUN5P1Q3KNT7 163 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 AMIGO2Q86SJ2 522 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 TRAPPC6BQ86SZ2 158 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 NDUFA11Q86Y39 141 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 Q8N2B8 174 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 MRPL48Q96GC5 212 aaKnown RBP11.11□□□□□ -0.63
SCAF4-206ENST00000485790 CENPNQ96H22 339 aaPredicted RBP11.11□□□□□ -0.63
SCAF4-206ENST00000485790 GABARAPL1Q9H0R8 117 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 IMPAD1Q9NX62 359 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 ORC6Q9Y5N6 252 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 SESN1Q9Y6P5 492 aa11.11□□□□□ -0.63
SCAF4-206ENST00000485790 WNK1Q9H4A3 2382 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 TMEM82A0PJX8 343 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 MEGF11A6BM72 1044 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 ODF3BA8MYP8 253 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 F8VVB4 439 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 F8VWA3 439 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 G3V4G9 280 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 H3BSH0 61 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 DYNC1I1O14576 645 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 ERP29P30040 261 aaKnown RBP11.1□□□□□ -0.63
SCAF4-206ENST00000485790 BNIP1Q12981 228 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 KPNB1Q14974 876 aaKnown RBP11.1□□□□□ -0.63
SCAF4-206ENST00000485790 SPIN3Q5JUX0 258 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 LHFPL2Q6ZUX7 228 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 SSX6Q7RTT6 188 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 RTN4RL2Q86UN3 420 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 TMEM219Q86XT9 240 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 RDH10Q8IZV5 341 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 DYNAPQ8N1N2 210 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 SGCDQ92629 289 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 EME1Q96AY2 570 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 CREB3L1Q96BA8 519 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 FGGYQ96C11 551 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 R3HDM4Q96D70 268 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 CIB1Q99828 191 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 CLEC7AQ9BXN2 247 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 TMEM133Q9H2Q1 129 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 GAL3ST2Q9H3Q3 398 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 RIBC2Q9H4K1 309 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 ZNF702PQ9H963 129 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 RHOFQ9HBH0 211 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 SERTAD4Q9NUC0 356 aa11.1□□□□□ -0.63
SCAF4-206ENST00000485790 UBE2J1Q9Y385 318 aaPredicted RBP11.1□□□□□ -0.63
SCAF4-206ENST00000485790 IGKV1-27A0A075B6S5 117 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 TRGV10A0A0A0MS01 117 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 DAPL1A0PJW8 107 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 MEX3AA1L020 520 aaKnown RBP11.09□□□□□ -0.63
SCAF4-206ENST00000485790 TOR1AO14656 332 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 CIB2O75838 187 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 APOL3O95236 402 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 CD28P10747 220 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 ATF1P18846 271 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 POLR2IP36954 125 aaKnown RBP11.09□□□□□ -0.63
SCAF4-206ENST00000485790 PDZK1IP1Q13113 114 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 ZNF146Q15072 292 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 BEAN1Q3B7T3 259 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 CCBE1Q6UXH8 406 aaPredicted RBP11.09□□□□□ -0.63
SCAF4-206ENST00000485790 UTS2BQ765I0 119 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 CENPVQ7Z7K6 275 aaPredicted RBP11.09□□□□□ -0.63
SCAF4-206ENST00000485790 ABHD12Q8N2K0 398 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 PRSS35Q8N3Z0 413 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 ZNF596Q8TC21 504 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 SPSB1Q96BD6 273 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 OR5M11Q96RB7 305 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 CHST6Q9GZX3 395 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 DPM3Q9P2X0 92 aa11.09□□□□□ -0.63
SCAF4-206ENST00000485790 IGHV2-26A0A0B4J1V2 119 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 TRBV2A0A0J9YWF9 115 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 LOC107986453A0A1B0GWG9 222 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 LEUTXA8MZ59 168 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 ISG15P05161 165 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 PRKACAP17612 351 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 DUSP1P28562 367 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 CEACAM3P40198 252 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 VDAC2P45880 294 aaPredicted RBP11.08□□□□□ -0.64
SCAF4-206ENST00000485790 POU3F4P49335 361 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 PRRX1P54821 245 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 P2RX3P56373 397 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 BLCAPP62952 87 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 HABP2Q14520 560 aaPredicted RBP11.08□□□□□ -0.64
SCAF4-206ENST00000485790 TP53I3Q53FA7 332 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 KPRPQ5T749 579 aaPredicted RBP11.08□□□□□ -0.64
SCAF4-206ENST00000485790 SAMD5Q5TGI4 173 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 MEDAGQ5VYS4 303 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 C16orf82Q7Z2V1 217 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 OR52N4Q8NGI2 321 aa11.08□□□□□ -0.64
SCAF4-206ENST00000485790 OR2G2Q8NGZ5 317 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms