RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 KIR2DS1A0A191URI9 304 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 F8VVB4 439 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 F8VWA3 439 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 FCN3O75636 299 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 ECDO95905 644 aaPredicted RBP8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 KNG1P01042 644 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 SFTPBP07988 381 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 AMY2BP19961 511 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 GABRR1P24046 479 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 CRHBPP24387 322 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 FPR2P25090 351 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 DUSP1P28562 367 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 MAP2K4P45985 399 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 NPBWR2P48146 333 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 SLC35A2P78381 396 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 COL10A1Q03692 680 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 PAX8Q06710 450 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 SCN1BQ07699 218 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 PDZK1IP1Q13113 114 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 EDDM3AQ14507 147 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 SPHARQ15513 63 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 KISS1Q15726 138 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 Q499Y3 187 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 YIF1BQ5BJH7 314 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 ATPAF1Q5TC12 328 aaPredicted RBP8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 PDZD9Q8IXQ8 264 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 FAM58AQ8N1B3 248 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 ZNF561Q8N587 486 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 OR4M1Q8NGD0 313 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 RPS4Y2Q8TD47 263 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 ZNF418Q8TF45 676 aaPredicted RBP8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 TNFAIP8L1Q8WVP5 186 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 UFD1Q92890 307 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 S100A13Q99584 98 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 SLC6A7Q99884 636 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 IL36RNQ9UBH0 155 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 RPUSD1Q9UJJ7 312 aaKnown RBP8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 GSTK1Q9Y2Q3 226 aa8.27□□□□□ -1.09
SPTLC1-206ENST00000482632 MEX3AA1L020 520 aaKnown RBP8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 ZNF879B4DU55 563 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 SIRPB1O00241 398 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 TCF21O43680 179 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 NOS1APO75052 506 aaPredicted RBP8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 HAND1O96004 215 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 MAS1P04201 325 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 LIPFP07098 398 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 GSTP1P09211 210 aaKnown RBP8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 IGHV4-38-2P0DP08 117 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 BDKRB2P30411 391 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 CAV3P56539 151 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 EDDM3BP56851 147 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 PAX2Q02962 417 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 PRB3Q04118 309 aaPredicted RBP8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 DOC2BQ14184 412 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 RSU1Q15404 277 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 GPR157Q5UAW9 335 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 LIPKQ5VXJ0 399 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 CMTM4Q8IZR5 234 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 JAGN1Q8N5M9 183 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 ZNF485Q8NCK3 441 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 OR52N4Q8NGI2 321 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 OR10K1Q8NGX5 313 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 LHX4Q969G2 390 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 PGLYRP3Q96LB9 341 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 WDFY2Q96P53 400 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 DCTN5Q9BTE1 182 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 CDCA4Q9BXL8 241 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 CHST6Q9GZX3 395 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 CNTD2Q9H8S5 307 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 HES4Q9HCC6 221 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 EXOSC4Q9NPD3 245 aaKnown RBP8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 ING3Q9NXR8 418 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 ZNF222Q9UK12 451 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 NUP50Q9UKX7 468 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 ING4Q9UNL4 249 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 MAB21L2Q9Y586 359 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 DSCAML1Q8TD84 2053 aa8.26□□□□□ -1.09
SPTLC1-206ENST00000482632 ATRQ13535 2644 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 IGKV1-12A0A0C4DH73 117 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 TRBV5-5A0A0J9YX44 114 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 A0A1W2PRD5 423 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 A0A1W2PRF3 423 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 A0A1W2PRM7 423 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 RNF212BA8MTL3 300 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 FAM229AH3BQW9 127 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 GABRPO00591 440 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 SH2D1BO14796 132 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 HTR3BO95264 441 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 IGKV1D-12P01611 117 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 CSTBP04080 98 aaKnown RBP8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 CHRM2P08172 466 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 ZNF44P15621 663 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 MAPK3P27361 379 aaPredicted RBP8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 ZNF93P35789 620 aaPredicted RBP8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 TGFBR2P37173 567 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 OR3A4PP47883 348 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 ERVK11-1P61568 191 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 RPL31P62899 125 aaKnown RBP8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 BDH1Q02338 343 aa8.25□□□□□ -1.09
SPTLC1-206ENST00000482632 BLMHQ13867 455 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms