RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 CLEC19AQ6UXS0 136 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 ZNF555Q8NEP9 628 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 ERMNQ8TAM6 284 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 PDCD6IPQ8WUM4 868 aaKnown RBP2.72□□□□□ -1.97
SF3B1-210ENST00000482158 SMIM8Q96KF7 97 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 METTL26Q96S19 204 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 PEBP4Q96S96 227 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 UTP23Q9BRU9 249 aaKnown RBP2.72□□□□□ -1.97
SF3B1-210ENST00000482158 BBS2Q9BXC9 721 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 ASB7Q9H672 318 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 ANKHQ9HCJ1 492 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 EMC3Q9P0I2 261 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 ZNF229Q9UJW7 825 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 SLC22A7Q9Y694 548 aa2.72□□□□□ -1.97
SF3B1-210ENST00000482158 COL5A1P20908 1838 aaPredicted RBP2.71□□□□□ -1.98
SF3B1-210ENST00000482158 PSMD11O00231 422 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 SULT1B1O43704 296 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 RHOCP08134 193 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 RPSAP08865 295 aaKnown RBP2.71□□□□□ -1.98
SF3B1-210ENST00000482158 ZNF35P13682 527 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 PTNP21246 168 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 CD34P28906 385 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 EVI2BP34910 448 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 DSTNP60981 165 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 DR1Q01658 176 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 STK38Q15208 465 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 BCL2A1Q16548 175 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 BRD3OSQ6XYD6 125 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 FAM58AQ8N1B3 248 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 CYP4Z2PQ8N1L4 340 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 ZDHHC22Q8N966 263 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 CDC26Q8NHZ8 85 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 CCDC12Q8WUD4 166 aaPredicted RBP2.71□□□□□ -1.98
SF3B1-210ENST00000482158 TRNT1Q96Q11 434 aaKnown RBP2.71□□□□□ -1.98
SF3B1-210ENST00000482158 CYTH2Q99418 400 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 MRPL20Q9BYC9 149 aaKnown RBP2.71□□□□□ -1.98
SF3B1-210ENST00000482158 SHCBP1LQ9BZQ2 653 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 API5Q9BZZ5 524 aaKnown RBP2.71□□□□□ -1.98
SF3B1-210ENST00000482158 VSIRQ9H7M9 311 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 TRIM45Q9H8W5 580 aaPredicted RBP2.71□□□□□ -1.98
SF3B1-210ENST00000482158 UCK1Q9HA47 277 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 STMN3Q9NZ72 180 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 ATPIF1Q9UII2 106 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 ZNF391Q9UJN7 358 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 ACOT9Q9Y305 439 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 ATP6V1DQ9Y5K8 247 aa2.71□□□□□ -1.98
SF3B1-210ENST00000482158 IGKV2-24A0A0C4DH68 120 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 SLC5A10A0PJK1 596 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 PRMT5O14744 637 aaPredicted RBP2.7□□□□□ -1.98
SF3B1-210ENST00000482158 CDK14O94921 469 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 KCNK2O95069 426 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 OR5F1O95221 314 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 VAPBO95292 243 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 HRES1P13985 223 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 GPR4P46093 362 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 TUFMP49411 452 aaKnown RBP2.7□□□□□ -1.98
SF3B1-210ENST00000482158 BAMBIQ13145 260 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 SPIN3Q5JUX0 258 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 CLLU1OSQ5K130 101 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 SYT6Q5T7P8 510 aaPredicted RBP2.7□□□□□ -1.98
SF3B1-210ENST00000482158 FAM231DQ6ZW35 169 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 TRMT10CQ7L0Y3 403 aaKnown RBP2.7□□□□□ -1.98
SF3B1-210ENST00000482158 PID1Q7Z2X4 250 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 NELFCDQ8IXH7 590 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 GAPTQ8N292 157 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 ZNF664Q8N3J9 261 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 OR4C13Q8NGP0 309 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 TVP23CQ96ET8 276 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 SPZ1Q9BXG8 430 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 SLC38A1Q9H2H9 487 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 LRRC19Q9H756 370 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 ABCB9Q9NP78 766 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 C12orf4Q9NQ89 552 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 RAB23Q9ULC3 237 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 AP3M1Q9Y2T2 418 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 R4GN34 69 aa2.7□□□□□ -1.98
SF3B1-210ENST00000482158 NUP205Q92621 2012 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 GOLGA6L4A6NEF3 574 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 C4orf51C9J302 202 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 ZNF593O00488 134 aaPredicted RBP2.69□□□□□ -1.98
SF3B1-210ENST00000482158 IGHG2P01859 326 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 APOA1P02647 267 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 ELOCQ15369 112 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 CLEC6AQ6EIG7 209 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 ZFAND6Q6FIF0 208 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 WDR59Q6PJI9 974 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 FAM19A1Q7Z5A9 133 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 SYS1Q8N2H4 156 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 CCNYL1Q8N7R7 359 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 OR6N2Q8NGY6 317 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 ADTRPQ96IZ2 230 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 RILPQ96NA2 401 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 PRORYQ9H606 182 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 OR2S2Q9NQN1 319 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 PARP11Q9NR21 331 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 SLC22A14Q9Y267 594 aa2.69□□□□□ -1.98
SF3B1-210ENST00000482158 BZW2Q9Y6E2 419 aaKnown RBP2.69□□□□□ -1.98
SF3B1-210ENST00000482158 BAZ1BQ9UIG0 1483 aaKnown RBP2.69□□□□□ -1.98
SF3B1-210ENST00000482158 IGKV3D-11A0A0A0MRZ8 115 aa2.68□□□□□ -1.98
SF3B1-210ENST00000482158 OR2A4O95047 310 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms