RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 G3V4G9 280 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 PEX14O75381 377 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 CYB5AP00167 134 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 IGHA1P01876 353 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 RBP4P02753 201 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 ZNF20P17024 532 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 PEX2P28328 305 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 DUSP1P28562 367 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 ATP1B3P54709 279 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 OR12D2P58182 307 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 CDC42P60953 191 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 ACTA2P62736 377 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 ACTG2P63267 376 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 ACTC1P68032 377 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 ACTA1P68133 377 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 ZNF85Q03923 595 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 MEF2CQ06413 473 aaPredicted RBP12.31□□□□□ -0.44
LIMS3-203ENST00000480744 NSUN5P1Q3KNT7 163 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 CCBE1Q6UXH8 406 aaPredicted RBP12.31□□□□□ -0.44
LIMS3-203ENST00000480744 TCF23Q7RTU1 214 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 ZNF676Q8N7Q3 588 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 NDNFQ8TB73 568 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 PP6455Q8WZ26 134 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 RFKQ969G6 155 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 MBOAT4Q96T53 435 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 RBFOX1Q9NWB1 397 aaKnown RBP12.31□□□□□ -0.44
LIMS3-203ENST00000480744 IMPAD1Q9NX62 359 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 PITPNC1Q9UKF7 332 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 HILPDAQ9Y5L2 63 aa12.31□□□□□ -0.44
LIMS3-203ENST00000480744 A6NDX4 124 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 F2RL2O00254 374 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 FBXO24O75426 580 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 BAG2O95816 211 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 OPN1MWP04001 364 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 OCM2P0CE71 109 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 OCMP0CE72 109 aaPredicted RBP12.3□□□□□ -0.44
LIMS3-203ENST00000480744 OPN1MW2P0DN77 364 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 OPN1MW3P0DN78 364 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 JUNBP17275 347 aaPredicted RBP12.3□□□□□ -0.44
LIMS3-203ENST00000480744 PRKACAP17612 351 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 BCL3P20749 454 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 NPBWR2P48146 333 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 RBP2P50120 134 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 ALDH3A2P51648 485 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 MTCP1P56278 107 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 SLC34A1Q06495 639 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 TMED1Q13445 227 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 RCN1Q15293 331 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 ZIK1Q3SY52 487 aaPredicted RBP12.3□□□□□ -0.44
LIMS3-203ENST00000480744 LDLRAD2Q5SZI1 272 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 TRAPPC6BQ86SZ2 158 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 Q8IYB0 196 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 C10orf67Q8IYJ2 551 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 ENTHD1Q8IYW4 607 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 FAM58AQ8N1B3 248 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 OR11H6Q8NGC7 330 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 OR52N4Q8NGI2 321 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 STMN2Q93045 179 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 ADAT3Q96EY9 351 aaPredicted RBP12.3□□□□□ -0.44
LIMS3-203ENST00000480744 OR5M11Q96RB7 305 aa12.3□□□□□ -0.44
LIMS3-203ENST00000480744 SIRPB1O00241 398 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 CD28P10747 220 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 ATF1P18846 271 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 AZGP1P25311 298 aaKnown RBP12.29□□□□□ -0.44
LIMS3-203ENST00000480744 ZNF91Q05481 1191 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 TMEM244Q5VVB8 128 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 DNAAF1Q8NEP3 725 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 OR4S1Q8NGB4 309 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 OR2G2Q8NGZ5 317 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 RFT1Q96AA3 541 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 FGGYQ96C11 551 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 C10orf35Q96D05 121 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 CDCA4Q9BXL8 241 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 PRSS22Q9GZN4 317 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 SERTAD4Q9NUC0 356 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 GLS2Q9UI32 602 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 LINC00312Q9Y6C7 94 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 SESN1Q9Y6P5 492 aa12.29□□□□□ -0.44
LIMS3-203ENST00000480744 IGHV2-26A0A0B4J1V2 119 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 IGKV1-9A0A0C4DH69 117 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 TRBV2A0A0J9YWF9 115 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 DAPL1A0PJW8 107 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 PSPNO60542 156 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 ENTPD6O75354 484 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 PRB2P02812 416 aaPredicted RBP12.28□□□□□ -0.44
LIMS3-203ENST00000480744 PRKACBP22694 351 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 ISL1P61371 349 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 BEAN1Q3B7T3 259 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 LHFPL2Q6ZUX7 228 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 RNFT2Q96EX2 444 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 C9orf16Q9BUW7 83 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 TMEM133Q9H2Q1 129 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 GSTK1Q9Y2Q3 226 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 ORC6Q9Y5N6 252 aa12.28□□□□□ -0.44
LIMS3-203ENST00000480744 MGST3O14880 152 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 HTR1AP08908 422 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 OR3A1P47881 315 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 P2RX3P56373 397 aa12.27□□□□□ -0.45
LIMS3-203ENST00000480744 NANOS3P60323 173 aaKnown RBP12.27□□□□□ -0.45
LIMS3-203ENST00000480744 TMEM95Q3KNT9 176 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms