RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 HPS1Q92902 700 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 BORCS5Q969J3 196 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 ARHGAP5-AS1Q96IT6 56 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 NEDD4LQ96PU5 975 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 PSMG3-AS1Q96PY0 264 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 PECRQ9BY49 303 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 AUNIPQ9H7T9 357 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 DCAF16Q9NXF7 216 aa14.79□□□□□ -0.04
UPF3A-206ENST00000480362 ABCA4P78363 2273 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 MYO18BQ8IUG5 2567 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 IGHV1-69-2A0A0G2JMI3 117 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 LRRC30A6NM36 301 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 CTDSPLO15194 276 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 OR7C1O76099 320 aaPredicted RBP14.78□□□□□ -0.04
UPF3A-206ENST00000480362 HIST1H1DP16402 221 aaKnown RBP14.78□□□□□ -0.04
UPF3A-206ENST00000480362 CDKN1AP38936 164 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 IKZF1Q13422 519 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 ZNF146Q15072 292 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 BAK1Q16611 211 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 MPV17LQ2QL34 196 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 SMIM21Q3B7S5 101 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 RNASE12Q5GAN4 147 aaKnown RBP14.78□□□□□ -0.04
UPF3A-206ENST00000480362 SPIN3Q5JUX0 258 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 NKAPLQ5M9Q1 402 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 ATAD3CQ5T2N8 411 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 C20orf204Q6ZNR8 217 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 LINC00596Q86U02 117 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 OR8H2Q8N162 312 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 Q8N402 240 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 NEU4Q8WWR8 484 aaPredicted RBP14.78□□□□□ -0.04
UPF3A-206ENST00000480362 CCL17Q92583 94 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 GCDHQ92947 438 aaPredicted RBP14.78□□□□□ -0.04
UPF3A-206ENST00000480362 CYYR1Q96J86 154 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 CXorf56Q9H5V9 222 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 PLEKHJ1Q9NW61 149 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 ELF5Q9UKW6 265 aaPredicted RBP14.78□□□□□ -0.04
UPF3A-206ENST00000480362 DYSFO75923 2080 aa14.78□□□□□ -0.04
UPF3A-206ENST00000480362 CACNA1DQ01668 2161 aa14.77□□□□□ -0.04
UPF3A-206ENST00000480362 FLNCQ14315 2725 aa14.77□□□□□ -0.04
UPF3A-206ENST00000480362 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.77□□□□□ -0.05
UPF3A-206ENST00000480362 H7C417 338 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 SH2D1BO14796 132 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 DEGS1O15121 323 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 PDCD6O75340 191 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 KNG1P01042 644 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 FUT3P21217 361 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 COL8A2P25067 703 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 CHATP28329 748 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 CD80P33681 288 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 PRSS3P35030 304 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 FAM201AQ5SY85 155 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 OLFML2AQ68BL7 652 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 SFRP4Q6FHJ7 346 aaPredicted RBP14.77□□□□□ -0.05
UPF3A-206ENST00000480362 Q6P435 159 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 BRICD5Q6PL45 260 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 C6orf201Q7Z4U5 140 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 C19orf18Q8NEA5 215 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 CCDC32Q9BV29 185 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 TMEM106BQ9NUM4 274 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 NLKQ9UBE8 527 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 DNAJB11Q9UBS4 358 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 OR14J1Q9UGF5 321 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 GLS2Q9UI32 602 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 HSF4Q9ULV5 492 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 KCNK7Q9Y2U2 307 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 NPTNQ9Y639 398 aa14.77□□□□□ -0.05
UPF3A-206ENST00000480362 IGHV3OR15-7A0A075B7D8 119 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 MEIOCA2RUB1 952 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 TMEM235A6NFC5 223 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 TMEM178BH3BS89 294 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 H3BUI4 141 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 IFNL4K9M1U5 179 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 MFNGO00587 321 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 ZNF205O95201 554 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 HAND1O96004 215 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 MELTFP08582 738 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 GSTP1P09211 210 aaKnown RBP14.76□□□□□ -0.05
UPF3A-206ENST00000480362 CSF3P09919 207 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 ZNF44P15621 663 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 CEBPDP49716 269 aaPredicted RBP14.76□□□□□ -0.05
UPF3A-206ENST00000480362 DGCR2P98153 550 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 GUCA2AQ02747 115 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 ARL6IP1Q15041 203 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 HFEQ30201 348 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 C16orf87Q6PH81 154 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 FAM90A1Q86YD7 464 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 C1orf87Q8N0U7 546 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 OR5T2Q8NGG2 359 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 FCAMRQ8WWV6 532 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 C14orf79Q96F83 325 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 THAP7Q9BT49 309 aaPredicted RBP14.76□□□□□ -0.05
UPF3A-206ENST00000480362 FAAP24Q9BTP7 215 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.76□□□□□ -0.05
UPF3A-206ENST00000480362 ABCB10Q9NRK6 738 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 WIPI2Q9Y4P8 454 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 PKDREJQ9NTG1 2253 aa14.76□□□□□ -0.05
UPF3A-206ENST00000480362 RFPL4AA6NLU0 287 aa14.75□□□□□ -0.05
UPF3A-206ENST00000480362 OR2AT4A6NND4 320 aa14.75□□□□□ -0.05
UPF3A-206ENST00000480362 RFPL4AL1F8VTS6 287 aa14.75□□□□□ -0.05
UPF3A-206ENST00000480362 LYNX1G3V0Z9 82 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms