RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 VSIG8P0DPA2 414 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 CALCBP10092 127 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 ZNF19P17023 458 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 AMY2BP19961 511 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 DUSP1P28562 367 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 BRS3P32247 399 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 CEACAM3P40198 252 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 RAB13P51153 203 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 ACTA2P62736 377 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 ACTG2P63267 376 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 EMX1Q04741 257 aaPredicted RBP5.75□□□□□ -1.49
COL17A1-205ENST00000480127 ZNF273Q14593 569 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 TMEM244Q5VVB8 128 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 LHFPL2Q6ZUX7 228 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 SATL1Q86VE3 508 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 C10orf67Q8IYJ2 551 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 OR8H2Q8N162 312 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 FAM58AQ8N1B3 248 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 OR4D6Q8NGJ1 314 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 OR8J1Q8NGP2 316 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 C17orf50Q8WW18 174 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 TNFRSF14Q92956 283 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 RFT1Q96AA3 541 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 MALSU1Q96EH3 234 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 RNFT2Q96EX2 444 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 SNX22Q96L94 193 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 S100A13Q99584 98 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 CLEC7AQ9BXN2 247 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 FAM192AQ9GZU8 254 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 FGF23Q9GZV9 251 aaPredicted RBP5.75□□□□□ -1.49
COL17A1-205ENST00000480127 COMMD4Q9H0A8 199 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 RANBP3Q9H6Z4 567 aaPredicted RBP5.75□□□□□ -1.49
COL17A1-205ENST00000480127 EXOSC4Q9NPD3 245 aaKnown RBP5.75□□□□□ -1.49
COL17A1-205ENST00000480127 NECAP2Q9NVZ3 263 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.75□□□□□ -1.49
COL17A1-205ENST00000480127 ZNF222Q9UK12 451 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 OAZ3Q9UMX2 235 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 GSTK1Q9Y2Q3 226 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 TBL2Q9Y4P3 447 aaKnown RBP5.75□□□□□ -1.49
COL17A1-205ENST00000480127 SESN1Q9Y6P5 492 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 V9GYS6 101 aa5.75□□□□□ -1.49
COL17A1-205ENST00000480127 PLXNB1O43157 2135 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 PRR32B1ATL7 298 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 HSPB6O14558 160 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 NOS1APO75052 506 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-205ENST00000480127 SULT1C4O75897 302 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 IGHV1-8P0DP01 117 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 TMEM225BP0DP42 221 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 CD33P20138 364 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 BCL3P20749 454 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 NFYBP25208 207 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 AZGP1P25311 298 aaKnown RBP5.74□□□□□ -1.49
COL17A1-205ENST00000480127 HTR1DP28221 377 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 MNDAP41218 407 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 KIR2DS4P43632 304 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 EFNB2P52799 333 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 PRRX1P54821 245 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 MEF2CQ06413 473 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-205ENST00000480127 HES1Q14469 280 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 AANATQ16613 207 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 ZIK1Q3SY52 487 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-205ENST00000480127 AADACL4Q5VUY2 407 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 C12orf73Q69YU5 71 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 KDM4DQ6B0I6 523 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 OR52W1Q6IF63 320 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 CCDC121Q6ZUS5 278 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 KCTD20Q7Z5Y7 419 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 LHFPL4Q7Z7J7 247 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 CENPVQ7Z7K6 275 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-205ENST00000480127 CATSPERDQ86XM0 798 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 CALHM1Q8IU99 346 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 RDH10Q8IZV5 341 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 TPRX1Q8N7U7 411 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 OR5D18Q8NGL1 313 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 OR13C9Q8NGT0 318 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 OR14K1Q8NGZ2 314 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 FGGYQ96C11 551 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 CENPNQ96H22 339 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-205ENST00000480127 OPALINQ96PE5 141 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 NR1H4Q96RI1 486 aaPredicted RBP5.74□□□□□ -1.49
COL17A1-205ENST00000480127 CHST5Q9GZS9 411 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 HHLA2Q9UM44 414 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 LINC00312Q9Y6C7 94 aa5.74□□□□□ -1.49
COL17A1-205ENST00000480127 IGHV2-26A0A0B4J1V2 119 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 TRBV2A0A0J9YWF9 115 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 FAM172BPA6NC97 362 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 MGST3O14880 152 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 DEGS1O15121 323 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 FADS2O95864 444 aaKnown RBP5.73□□□□□ -1.49
COL17A1-205ENST00000480127 RBP4P02753 201 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 RPSAP08865 295 aaKnown RBP5.73□□□□□ -1.49
COL17A1-205ENST00000480127 MPZP25189 248 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 EPHA2P29317 976 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 PTGFRP43088 359 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 GLP1RP43220 463 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 OR3A4PP47883 348 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 TMED1Q13445 227 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 HABP2Q14520 560 aaPredicted RBP5.73□□□□□ -1.49
COL17A1-205ENST00000480127 UBE2V2Q15819 145 aa5.73□□□□□ -1.49
COL17A1-205ENST00000480127 SPIN3Q5JUX0 258 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms