RNA–Protein interactions for RNA: ENST00000479859.1

UBXN2A-204, Transcript of UBX domain protein 2A, human

TSL 2

Gene UBXN2A, Length 403 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBXN2A-204	ENST00000479859	UQCRH	P07919	91 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	ZNF17	P17021	662 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	TUBG1	P23258	451 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	RFC3	P40938	356 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	CDKN2B	P42772	138 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	IHH	Q14623	411 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	PSG5	Q15238	335 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	SPA17	Q15506	151 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	TAF1A	Q15573	450 aa	Predicted RBP	4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	POU2AF1	Q16633	256 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	TRMT5	Q32P41	509 aa	Known RBP	4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	ULK3	Q6PHR2	472 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	STPG2	Q8N412	459 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	LRRC75A	Q8NAA5	344 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	FDCSP	Q8NFU4	85 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	MITD1	Q8WV92	249 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	GALNT14	Q96FL9	552 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	TRIB3	Q96RU7	358 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	FOXC2	Q99958	501 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	KIR3DX1	Q9H7L2	352 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	ISYNA1	Q9NPH2	558 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	TUBG2	Q9NRH3	451 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	IFNK	Q9P0W0	207 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	YARS2	Q9Y2Z4	477 aa	Known RBP	4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	PCM1	Q15154	2024 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	MAST4	O15021	2626 aa		4.37	□□□□□ -1.71
UBXN2A-204	ENST00000479859	SHANK1	Q9Y566	2161 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	IGLV11-55	A0A075B6I3	123 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	CIB4	A0PJX0	185 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859		A6NDX4	124 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	FAM166B	A8MTA8	275 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	FAM25E	A8MYX2	175 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	HPRT1	P00492	218 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	KRT16	P08779	473 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	MAS1L	P35410	378 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	CEACAM6	P40199	344 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	CD151	P48509	253 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	LHX2	P50458	406 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	RND2	P52198	227 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	UBE2M	P61081	183 aa	Known RBP	4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	PPP1CA	P62136	330 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	RPS15A	P62244	130 aa	Known RBP	4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	DCD	P81605	110 aa	Known RBP	4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	CHRFAM7A	Q494W8	412 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	TFDP3	Q5H9I0	405 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	GPR107	Q5VW38	600 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	CLEC18B	Q6UXF7	455 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	FAM122B	Q7Z309	247 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	SNX20	Q7Z614	316 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	CDKL3	Q8IVW4	592 aa	Predicted RBP	4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	ZNF567	Q8N184	647 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	CBR4	Q8N4T8	237 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859		Q8N9W7	124 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	OR4K2	Q8NGD2	314 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	OR10G4	Q8NGN3	311 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	RNF138	Q8WVD3	245 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	APH1B	Q8WW43	257 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	TFG	Q92734	400 aa	Predicted RBP	4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	CIDEC	Q96AQ7	238 aa	Predicted RBP	4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	ZIM3	Q96PE6	472 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	LZTFL1	Q9NQ48	299 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	BTRC	Q9Y297	605 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	HIVEP3	Q5T1R4	2406 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	CFAP46	Q8IYW2	2715 aa		4.36	□□□□□ -1.71
UBXN2A-204	ENST00000479859	IGHV3-64D	A0A0J9YX35	117 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859		A0A1B0GUH1	482 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	SS18L1	O75177	396 aa	Predicted RBP	4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	RPN2	P04844	631 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	GYPC	P04921	128 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	FABP3	P05413	133 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	S100A9	P06702	114 aa	Known RBP	4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	STAG3L2	P0CL84	134 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	NR2C1	P13056	603 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	GGT1	P19440	569 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	CXCL5	P42830	114 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	CARD18	P57730	90 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	TMED1	Q13445	227 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	HES5	Q5TA89	166 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	MRPL55	Q7Z7F7	128 aa	Known RBP	4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	SLC34A3	Q8N130	599 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	CHST4	Q8NCG5	386 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	MDS2	Q8NDY4	140 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	NOXO1	Q8NFA2	376 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	OR52E2	Q8NGJ4	325 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	OR6Q1	Q8NGQ2	317 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	RNF185	Q96GF1	192 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	WFIKKN1	Q96NZ8	548 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	OLFM3	Q96PB7	478 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	GPR21	Q99679	349 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	NUDT9	Q9BW91	350 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	SLC25A2	Q9BXI2	301 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	CDC42EP4	Q9H3Q1	356 aa	Known RBP	4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	FAM96A	Q9H5X1	160 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	MCUB	Q9NWR8	336 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	HYOU1	Q9Y4L1	999 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	ARL5A	Q9Y689	179 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	DOCK10	Q96BY6	2186 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859	LRRK2	Q5S007	2527 aa		4.35	□□□□□ -1.71
UBXN2A-204	ENST00000479859		A0A0J9YY10	115 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms