RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 FAM221AA4D161 298 aa11.58□□□□□ -0.56
PDZRN3-208ENST00000479530 F5H5K5 113 aa11.58□□□□□ -0.56
PDZRN3-208ENST00000479530 H7C1Q1 480 aa11.58□□□□□ -0.56
PDZRN3-208ENST00000479530 ETV2O00321 342 aaPredicted RBP11.58□□□□□ -0.56
PDZRN3-208ENST00000479530 SLC34A2O95436 690 aa11.58□□□□□ -0.56
PDZRN3-208ENST00000479530 CXCL12P48061 93 aa11.58□□□□□ -0.56
PDZRN3-208ENST00000479530 RAB5CP51148 216 aa11.58□□□□□ -0.56
PDZRN3-208ENST00000479530 PDZD11Q5EBL8 140 aa11.58□□□□□ -0.56
PDZRN3-208ENST00000479530 OR11L1Q8NGX0 322 aa11.58□□□□□ -0.56
PDZRN3-208ENST00000479530 CHST5Q9GZS9 411 aa11.58□□□□□ -0.56
PDZRN3-208ENST00000479530 ANXA10Q9UJ72 324 aa11.58□□□□□ -0.56
PDZRN3-208ENST00000479530 BORCS7-ASMTA0A0B4J1R7 106 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 A0A1W2PNV4 684 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 H0YL77 283 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 WRBO00258 174 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 ANGPTL7O43827 346 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 DKK1O94907 266 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 SUMO3P55854 103 aaPredicted RBP11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 SLC25A47Q6Q0C1 308 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 C1QL4Q86Z23 238 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 OR5L1Q8NGL2 311 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 Q8WTZ3 238 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 RTN4IP1Q8WWV3 396 aaPredicted RBP11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 B3GALT1Q9Y5Z6 326 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 CCDC187A0A096LP49 1063 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 K7N7A8 449 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 GPR137BO60478 399 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 IGHG1P01857 330 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 MAS1LP35410 378 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 CDX1P47902 265 aaPredicted RBP11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 CSNK1A1P48729 337 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 SUMF2Q8NBJ7 301 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 NAXEQ8NCW5 288 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 PGAM5Q96HS1 289 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 UCN2Q96RP3 112 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 DEFB126Q9BYW3 111 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 TREM2Q9NZC2 230 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 CHCHD2Q9Y6H1 151 aaPredicted RBP11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 EXPH5Q8NEV8 1989 aa11.57□□□□□ -0.56
PDZRN3-208ENST00000479530 NSG1A0A0A6YYJ2 146 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 SFTPCP11686 197 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 EPHA8P29322 1005 aaPredicted RBP11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 SUCLG1P53597 346 aaKnown RBP11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 CLDN17P56750 224 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 ERVFRD-1P60508 538 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 TAF9Q16594 264 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 SLC25A53Q5H9E4 307 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 ZFP62Q8NB50 900 aaPredicted RBP11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 OR5L2Q8NGL0 311 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 NTNG2Q96CW9 530 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 RAB39BQ96DA2 213 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 SPACA9Q96E40 222 aaPredicted RBP11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 ZNF837Q96EG3 531 aaPredicted RBP11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 TM2D1Q9BX74 207 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 NAA60Q9H7X0 242 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 DECR2Q9NUI1 292 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 ZNF850A8MQ14 1090 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 H3BQ15 152 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 DBHP09172 617 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 CHATP28329 748 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 SLC16A14Q7RTX9 510 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 ZNF385AQ96PM9 386 aaKnown RBP11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 PBDC1Q9BVG4 233 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 AK3Q9UIJ7 227 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 HS3ST3B1Q9Y662 390 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 TGIF2-C20orf24A0A0A6YYL0 155 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 OR5H15A6NDH6 313 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 RRP8O43159 456 aaKnown RBP11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 OMGP23515 440 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 ALDH3B1P43353 468 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 CHAF1BQ13112 559 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 UNQ6494/PRO21346Q6UXR6 183 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 FBXW12Q6X9E4 464 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 LRRC18Q8N456 261 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 ARL6IP6Q8N6S5 226 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 SAP25Q8TEE9 199 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 S100A13Q99584 98 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 PRDM13Q9H4Q3 707 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 PIGLQ9Y2B2 252 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 KCNIP3Q9Y2W7 256 aa11.56□□□□□ -0.56
PDZRN3-208ENST00000479530 FAM24AA6NFZ4 105 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 SPRY1O43609 319 aaPredicted RBP11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 ZNF728P0DKX0 622 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 CCL4P13236 92 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 ELOBQ15370 118 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 FAM189A2Q15884 450 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 ZNF674Q2M3X9 581 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 RSPO1Q2MKA7 263 aaPredicted RBP11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 HLA-BQ31612 363 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 SPSB3Q6PJ21 355 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 HIST2H3AQ71DI3 136 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 OR10D4PQ8NGN7 298 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 PIGQQ9BRB3 760 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 SLC2A9Q9NRM0 540 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 CCL3P10147 92 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 RND3P61587 244 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 RAB1AP62820 205 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 PDCD1Q15116 288 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 ABCA11PQ4W5N1 156 aa11.55□□□□□ -0.56
PDZRN3-208ENST00000479530 SUMF1Q8NBK3 374 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms