RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 HTR1DP28221 377 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 POU3F4P49335 361 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 FUT6P51993 359 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 SNU13P55769 128 aaKnown RBP10.64□□□□□ -0.71
VCL-205ENST00000478896 UBE2V2Q15819 145 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 DNAL1Q4LDG9 190 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 KHDC1LQ5JSQ8 128 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 FAHD1Q6P587 224 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 Q6ZSR3 168 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 SSX6Q7RTT6 188 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 Q8IYB0 196 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 ENTHD1Q8IYW4 607 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 TMEM163Q8TC26 289 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 WIPF2Q8TF74 440 aaPredicted RBP10.64□□□□□ -0.71
VCL-205ENST00000478896 IL4I1Q96RQ9 567 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 TMEM133Q9H2Q1 129 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 GLS2Q9UI32 602 aa10.64□□□□□ -0.71
VCL-205ENST00000478896 IGKV1-27A0A075B6S5 117 aa10.63□□□□□ -0.71
VCL-205ENST00000478896 TCRBV3S1A0A5B6 114 aa10.63□□□□□ -0.71
VCL-205ENST00000478896 TMEM82A0PJX8 343 aa10.63□□□□□ -0.71
VCL-205ENST00000478896 MITFO75030 526 aaPredicted RBP10.63□□□□□ -0.71
VCL-205ENST00000478896 IGLL1P15814 213 aa10.63□□□□□ -0.71
VCL-205ENST00000478896 ARHGDIBP52566 201 aa10.63□□□□□ -0.71
VCL-205ENST00000478896 SLC35A2P78381 396 aa10.63□□□□□ -0.71
VCL-205ENST00000478896 ZNF91Q05481 1191 aa10.63□□□□□ -0.71
VCL-205ENST00000478896 AADACL4Q5VUY2 407 aa10.63□□□□□ -0.71
VCL-205ENST00000478896 C16orf82Q7Z2V1 217 aa10.63□□□□□ -0.71
VCL-205ENST00000478896 FAM220AQ7Z4H9 259 aa10.63□□□□□ -0.71
VCL-205ENST00000478896 CENPVQ7Z7K6 275 aaPredicted RBP10.63□□□□□ -0.71
VCL-205ENST00000478896 CATSPERDQ86XM0 798 aa10.63□□□□□ -0.71
VCL-205ENST00000478896 OR10H4Q8NGA5 316 aa10.63□□□□□ -0.71
VCL-205ENST00000478896 STMN2Q93045 179 aa10.63□□□□□ -0.71
VCL-205ENST00000478896 RBFOX1Q9NWB1 397 aaKnown RBP10.63□□□□□ -0.71
VCL-205ENST00000478896 IL36RNQ9UBH0 155 aa10.63□□□□□ -0.71
VCL-205ENST00000478896 A0A1W2PQL4 384 aaPredicted RBP10.62□□□□□ -0.71
VCL-205ENST00000478896 TCRBV4S1A1TA0A5B7 111 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 ZAR1LA6NP61 321 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 PSPNO60542 156 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 APOL3O95236 402 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 OCM2P0CE71 109 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 OCMP0CE72 109 aaPredicted RBP10.62□□□□□ -0.71
VCL-205ENST00000478896 PRKACAP17612 351 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 BCL3P20749 454 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 DUSP1P28562 367 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 BRS3P32247 399 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 ATP6V1E1P36543 226 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 RBP2P50120 134 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 ATP1B3P54709 279 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 CD83Q01151 205 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 C12orf73Q69YU5 71 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 CCDC121Q6ZUS5 278 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 FAM58AQ8N1B3 248 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 CCDC54Q8NEL0 328 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 OR4X2Q8NGF9 303 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 OR52N4Q8NGI2 321 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 OR4P4Q8NGL7 312 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 ZNF596Q8TC21 504 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 C10orf35Q96D05 121 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 OCSTAMPQ9BR26 566 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 SLC25A33Q9BSK2 321 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 GAL3ST2Q9H3Q3 398 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.62□□□□□ -0.71
VCL-205ENST00000478896 WARS2Q9UGM6 360 aaKnown RBP10.62□□□□□ -0.71
VCL-205ENST00000478896 POMPQ9Y244 141 aa10.62□□□□□ -0.71
VCL-205ENST00000478896 UBE2J1Q9Y385 318 aaPredicted RBP10.62□□□□□ -0.71
VCL-205ENST00000478896 TSSC4Q9Y5U2 329 aaPredicted RBP10.62□□□□□ -0.71
VCL-205ENST00000478896 TRGV10A0A0A0MS01 117 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 TRBV2A0A0J9YWF9 115 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 LOC107986453A0A1B0GWG9 222 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 FAM172BPA6NC97 362 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 METTL15A6NJ78 407 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 SIRPB1O00241 398 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 MGST3O14880 152 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 CLIC3O95833 236 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 LPLP06858 475 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 OR2T7P0C7T2 308 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 UBCP0CG48 685 aaKnown RBP10.61□□□□□ -0.71
VCL-205ENST00000478896 CALCBP10092 127 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 CD24P25063 80 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 EPHA2P29317 976 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 ABCA11PQ4W5N1 156 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 SPIN3Q5JUX0 258 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 PRAMEF5Q5TYX0 476 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 OR52W1Q6IF63 320 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 ABHD12Q8N2K0 398 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 PP6455Q8WZ26 134 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 LIN7BQ9HAP6 207 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 EXOSC4Q9NPD3 245 aaKnown RBP10.61□□□□□ -0.71
VCL-205ENST00000478896 DPM3Q9P2X0 92 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 ENOPH1Q9UHY7 261 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 GNG8Q9UK08 70 aa10.61□□□□□ -0.71
VCL-205ENST00000478896 FUOMA2VDF0 154 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 FAM90A22PA8MWA6 464 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 G3V2T6 193 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 ENTPD6O75354 484 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 SULT1C4O75897 302 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 MMP23AO75900 390 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 ZNF20P17024 532 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 HTR1FP30939 366 aa10.6□□□□□ -0.71
VCL-205ENST00000478896 NPBWR2P48146 333 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms