RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 B4E171 279 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 EEF1E1-BLOC1S5C9J1V9 151 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 F5H0A9 414 aaPredicted RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 F5H5K5 113 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 F8VVB4 439 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 F8VWA3 439 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 STMND1H3BQB6 276 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 ZIC3O60481 467 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 RAD51DO75771 328 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 KLF7O75840 302 aaPredicted RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 SCO1O75880 301 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 P04436 131 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 CELA2AP08217 269 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 HOXD4P09016 255 aaPredicted RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 CST2P09228 141 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 PET100P0DJ07 73 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 FCGR2AP12318 317 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 LYL1P12980 280 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 ICAM2P13598 275 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 TPT1P13693 172 aaKnown RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 KLK2P20151 261 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 PRKACBP22694 351 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 BLVRBP30043 206 aaPredicted RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 SERPINF1P36955 418 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 TSPAN7P41732 249 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 LUMP51884 338 aaPredicted RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 RAC3P60763 192 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 EIF5AP63241 154 aaKnown RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 NAAAQ02083 359 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 SCRN3Q0VDG4 424 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 CHAF1BQ13112 559 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 SNTB1Q13884 538 aaKnown RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 LRRC37A5PQ49AS3 106 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 PAN3Q58A45 887 aaKnown RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 PHYHD1Q5SRE7 291 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 FAM27BQ5VT28 67 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 PRSS54Q6PEW0 395 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 UQCC3Q6UW78 93 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 DRAM2Q6UX65 266 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 SLC16A14Q7RTX9 510 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 RNF144BQ7Z419 303 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 SLC38A6Q8IZM9 456 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 GPR137CQ8N3F9 429 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 SPERTQ8NA61 448 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 CSNK2A3Q8NEV1 391 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 OR10K1Q8NGX5 313 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 OR13G1Q8NGZ3 307 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 STOML3Q8TAV4 291 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 CPT1CQ8TCG5 803 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 DCUN1D4Q92564 292 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 HAS2Q92819 552 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 TMEM230Q96A57 120 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 SPSB1Q96BD6 273 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 SEC22AQ96IW7 307 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 LYZL4Q96KX0 146 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF385AQ96PM9 386 aaKnown RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 RBM24Q9BX46 236 aaKnown RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 SHARPINQ9H0F6 387 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 C5orf66Q9H5L9 145 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 AKIRIN1Q9H9L7 192 aaPredicted RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 FN3KRPQ9HA64 309 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 PROK2Q9HC23 129 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 PLEK2Q9NYT0 353 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 MBD2Q9UBB5 411 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 ZNF391Q9UJN7 358 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 C14orf166Q9Y224 244 aaKnown RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 OSGIN2Q9Y236 505 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 PIGLQ9Y2B2 252 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 MEMO1Q9Y316 297 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 MRPS18CQ9Y3D5 142 aaKnown RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 ARHGAP21Q5T5U3 1957 aa4.29□□□□□ -1.72
SF3B6-202ENST00000478050 TNRC6AQ8NDV7 1962 aaKnown RBP4.29□□□□□ -1.72
SF3B6-202ENST00000478050 PCSK5Q92824 1860 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 TLN1Q9Y490 2541 aaKnown RBP4.28□□□□□ -1.72
SF3B6-202ENST00000478050 KNTC1P50748 2209 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 IGHV3-15A0A0B4J1V0 119 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 C13orf42A0A1B0GVH6 325 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 A0A1W2PP11 408 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 RAB19A4D1S5 217 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 C9orf118A6NHY6 69 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 E9PLN8 166 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 TEX46H3BTG2 121 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 TNFSF11O14788 317 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 SMAD9O15198 467 aaKnown RBP4.28□□□□□ -1.72
SF3B6-202ENST00000478050 FGF16O43320 207 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 SGCEO43556 437 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 HPNP05981 417 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 CTSDP07339 412 aaPredicted RBP4.28□□□□□ -1.72
SF3B6-202ENST00000478050 CCL4P13236 92 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 PGAM2P15259 253 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 SERPINA2P20848 420 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 CNR1P21554 472 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 CRYGSP22914 178 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 NPY4RP50391 375 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 SNU13P55769 128 aaKnown RBP4.28□□□□□ -1.72
SF3B6-202ENST00000478050 B3GALT5-AS1P59052 145 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 PCBD1P61457 104 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 PPIAP62937 165 aaKnown RBP4.28□□□□□ -1.72
SF3B6-202ENST00000478050 MALLQ13021 153 aa4.28□□□□□ -1.72
SF3B6-202ENST00000478050 ATXN7L3Q14CW9 347 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms