RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 HAS2Q92819 552 aa8.53□□□□□ -1.04
CMC1-209ENST00000477739 INTS12Q96CB8 462 aaKnown RBP8.53□□□□□ -1.04
CMC1-209ENST00000477739 RTBDNQ9BSG5 229 aaPredicted RBP8.53□□□□□ -1.04
CMC1-209ENST00000477739 MMP26Q9NRE1 261 aa8.53□□□□□ -1.04
CMC1-209ENST00000477739 NDRG3Q9UGV2 375 aa8.53□□□□□ -1.04
CMC1-209ENST00000477739 GPR132Q9UNW8 380 aa8.53□□□□□ -1.04
CMC1-209ENST00000477739 PPP1R3CQ9UQK1 317 aa8.53□□□□□ -1.04
CMC1-209ENST00000477739 A0A1B0GTI1 187 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 A0A1W2PQM1 296 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 ZNF705GA8MUZ8 300 aaPredicted RBP8.52□□□□□ -1.05
CMC1-209ENST00000477739 WDR1O75083 606 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 SCAF4O95104 1147 aaKnown RBP8.52□□□□□ -1.05
CMC1-209ENST00000477739 FOSL2P15408 326 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 MSR1P21757 451 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 ACKR3P25106 362 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 GDF1P27539 372 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 HAAOP46952 286 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 TAS2R46P59540 309 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 THEM4Q5T1C6 240 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 DOK3Q7L591 496 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 AAED1Q7RTV5 226 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 RPS4Y2Q8TD47 263 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 FAM212BQ9NTI7 297 aaPredicted RBP8.52□□□□□ -1.05
CMC1-209ENST00000477739 ZNF816-ZNF321PA0A0X1KG74 233 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 ZNF708P17019 499 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 MSX1P28360 303 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 EPHA8P29322 1005 aaPredicted RBP8.52□□□□□ -1.05
CMC1-209ENST00000477739 EIF5AP63241 154 aaKnown RBP8.52□□□□□ -1.05
CMC1-209ENST00000477739 TGFBR3Q03167 851 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 CXorf66Q5JRM2 361 aaPredicted RBP8.52□□□□□ -1.05
CMC1-209ENST00000477739 FAM209BQ5JX69 171 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 NSUN5P2Q63ZY6 315 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 SPTSSAQ969W0 71 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 MARS2Q96GW9 593 aaKnown RBP8.52□□□□□ -1.05
CMC1-209ENST00000477739 MRGPRX4Q96LA9 322 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 METTL9Q9H1A3 318 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 ATG2AQ2TAZ0 1938 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 IGHV5-10-1A0A0J9YXX1 117 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 NKX2-6A6NCS4 301 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 FTCDNL1E5RQL4 147 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 DEFA4P12838 97 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 ZNF154Q13106 437 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 THNSL2Q86YJ6 484 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 ZNF808Q8N4W9 903 aaPredicted RBP8.52□□□□□ -1.05
CMC1-209ENST00000477739 ZDHHC22Q8N966 263 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 SLC30A7Q8NEW0 376 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 GJC3Q8NFK1 279 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 HPSE2Q8WWQ2 592 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 DNASE2BQ8WZ79 361 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 SLC26A1Q9H2B4 701 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 LUZP4Q9P127 313 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 COL6A6A6NMZ7 2263 aa8.52□□□□□ -1.05
CMC1-209ENST00000477739 EML6Q6ZMW3 1958 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 CCDC187A0A096LP49 1063 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 TUBAL3A6NHL2 446 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 CYB5BO43169 146 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 APOC1P02654 83 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 MBPP02686 304 aaPredicted RBP8.51□□□□□ -1.05
CMC1-209ENST00000477739 HKR1P10072 659 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 SCAND1P57086 179 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 MALLQ13021 153 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 PABPC1L2AQ5JQF8 200 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 ZNF441Q8N8Z8 693 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 OR5C1Q8NGR4 320 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 MARVELD3Q96A59 401 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 SPACA9Q96E40 222 aaPredicted RBP8.51□□□□□ -1.05
CMC1-209ENST00000477739 C5orf49A4QMS7 147 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 DHHO43323 396 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 ADAM20O43506 726 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 IGFBP3P17936 291 aaPredicted RBP8.51□□□□□ -1.05
CMC1-209ENST00000477739 AADACP22760 399 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 FPR2P25090 351 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 SUMO3P55854 103 aaPredicted RBP8.51□□□□□ -1.05
CMC1-209ENST00000477739 CCL20P78556 96 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 MPV17LQ2QL34 196 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 AKR1C8PQ5T2L2 129 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 PLA2G3Q9NZ20 509 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 LRFN1Q9P244 771 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 RCC2Q9P258 522 aaKnown RBP8.51□□□□□ -1.05
CMC1-209ENST00000477739 B3GAT1Q9P2W7 334 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 SMCO3A2RU48 225 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 NRASP01111 189 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 CD74P04233 296 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 PMP22Q01453 160 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 FDX2Q6P4F2 183 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 OR10D4PQ8NGN7 298 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 IFI44Q8TCB0 444 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 TMPRSS5Q9H3S3 457 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 OPA3Q9H6K4 179 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 SLC2A9Q9NRM0 540 aa8.51□□□□□ -1.05
CMC1-209ENST00000477739 NSG1A0A0A6YYJ2 146 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 A0A0G2JMM0 328 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 A0A1W2PPB8 328 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 A0A1W2PRS3 328 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 KIR3DP1A8MWS1 328 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 TRAF3IP2O43734 574 aaPredicted RBP8.5□□□□□ -1.05
CMC1-209ENST00000477739 TUSC2O75896 110 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 CD8AP01732 235 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 TFF1P04155 84 aa8.5□□□□□ -1.05
CMC1-209ENST00000477739 ACAA1P09110 424 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms