RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 TMEM104Q8NE00 496 aa13.18□□□□□ -0.3
COPS3-207ENST00000477299 C12orf43Q96C57 262 aaKnown RBP13.18□□□□□ -0.3
COPS3-207ENST00000477299 RAB39BQ96DA2 213 aa13.18□□□□□ -0.3
COPS3-207ENST00000477299 BANF2Q9H503 90 aa13.18□□□□□ -0.3
COPS3-207ENST00000477299 KAAG1Q9UBP8 84 aa13.18□□□□□ -0.3
COPS3-207ENST00000477299 ANK3Q12955 4377 aaKnown RBP13.18□□□□□ -0.3
COPS3-207ENST00000477299 A0A0B4J203 849 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 C22orf46C9J442 243 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 SIRPB1O00241 398 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 KNG1P01042 644 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 SLC2A2P11168 524 aaPredicted RBP13.17□□□□□ -0.3
COPS3-207ENST00000477299 GALP22466 123 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 SDC2P34741 201 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 GZMKP49863 264 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 MXD1Q05195 221 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 SCN1BQ07699 218 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 PLA2G7Q13093 441 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 GLT8D1Q68CQ7 371 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 AWAT2Q6E213 333 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 ELP2Q6IA86 826 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 Q6P435 159 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 SLC16A12Q6ZSM3 486 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 CDH26Q8IXH8 852 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 NKAIN3Q8N8D7 197 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 LINC01356Q8N9X3 169 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 Q8NFD4 153 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 OR8B3Q8NGG8 313 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 SDSLQ96GA7 329 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 OR8B2Q96RD0 313 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 SLITRK2Q9H156 845 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 METTL9Q9H1A3 318 aa13.17□□□□□ -0.3
COPS3-207ENST00000477299 SLC22A1O15245 554 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 SIGLEC5O15389 551 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 NDUFA2O43678 99 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 CD5LO43866 347 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 AIREO43918 545 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 HAND1O96004 215 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 HTR2CP28335 458 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 NCS1P62166 190 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 GNB2P62879 340 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 IL13RA1P78552 427 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 PAX2Q02962 417 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 ZNF146Q15072 292 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 KCNJ8Q15842 424 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 ESCO2Q56NI9 601 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 GPR107Q5VW38 600 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 CLEC9AQ6UXN8 241 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 C17orf107Q6ZR85 190 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 PNLDC1Q8NA58 520 aaKnown RBP13.16□□□□□ -0.3
COPS3-207ENST00000477299 TMEM185AQ8NFB2 350 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 ST8SIA4Q92187 359 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 FAM46BQ96A09 425 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 UQCC2Q9BRT2 126 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 SSBP3Q9BWW4 388 aaPredicted RBP13.16□□□□□ -0.3
COPS3-207ENST00000477299 CLN8Q9UBY8 286 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 V9GY05 133 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 SVEP1Q4LDE5 3571 aa13.16□□□□□ -0.3
COPS3-207ENST00000477299 SONP18583 2426 aaKnown RBP13.15□□□□□ -0.3
COPS3-207ENST00000477299 MEX3AA1L020 520 aaKnown RBP13.15□□□□□ -0.3
COPS3-207ENST00000477299 B4DSR2 109 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 NDUFB3O43676 98 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 PSPNO60542 156 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 ZNF737O75373 536 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 OR2H2O95918 312 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 MSMBP08118 114 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 VSIG8P0DPA2 414 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 RAB3BP20337 219 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 MYL9P24844 172 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 MTNR1BP49286 362 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 FGF12P61328 243 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 QRFPP83859 136 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 BRICD5Q6PL45 260 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 BTN2A1Q7KYR7 527 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 SLC36A1Q7Z2H8 476 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 Q8IYB0 196 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 OSR2Q8N2R0 312 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 OR4S1Q8NGB4 309 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 OR51T1Q8NGJ9 327 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 CPNE2Q96FN4 548 aaPredicted RBP13.15□□□□□ -0.3
COPS3-207ENST00000477299 KCTD7Q96MP8 289 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 S100A13Q99584 98 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 CHST6Q9GZX3 395 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 SHARPINQ9H0F6 387 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 PLGRKTQ9HBL7 147 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 YAE1D1Q9NRH1 226 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 HIF1ANQ9NWT6 349 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 IL36GQ9NZH8 169 aa13.15□□□□□ -0.3
COPS3-207ENST00000477299 NKX6-3A6NJ46 265 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 A8MXK9 166 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 SLC17A2O00624 439 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 GEMIN2O14893 280 aaKnown RBP13.14□□□□□ -0.31
COPS3-207ENST00000477299 AVPP01185 164 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 HEXAP06865 529 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 NDUFB7P17568 137 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 VBP1P61758 197 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 UNC119Q13432 240 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 NLRC3Q7RTR2 1065 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 BIVMQ86UB2 503 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 RTN4RL2Q86UN3 420 aa13.14□□□□□ -0.31
COPS3-207ENST00000477299 ASCC1Q8N9N2 400 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms