RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, human

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5A-208	ENST00000476544	RIPK1	Q13546	671 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	PDCD1	Q15116	288 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	METTL11B	Q5VVY1	283 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544		Q6P435	159 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544		Q6YL49	198 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	TCF23	Q7RTU1	214 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	MKX	Q8IYA7	352 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	FAM58A	Q8N1B3	248 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544		Q8NFD4	153 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	HAVCR2	Q8TDQ0	301 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	SMIM19	Q96E16	107 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	OR5M11	Q96RB7	305 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	COMMD4	Q9H0A8	199 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	TAS2R4	Q9NYW5	299 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	ONECUT1	Q9UBC0	465 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	DHDH	Q9UQ10	334 aa		11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	LSM2	Q9Y333	95 aa	Known RBP	11.18	□□□□□ -0.62
RAB5A-208	ENST00000476544	TRAV8-7	A0A075B6U6	113 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544		A0A0U1RQK1	487 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	MEX3A	A1L020	520 aa	Known RBP	11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	DNAJC9-AS1	A6NH13	148 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	SLC1A7	O00341	560 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	RPSA	P08865	295 aa	Known RBP	11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	CCL3L1	P16619	93 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	MYL12A	P19105	171 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	BPIFB3	P59826	476 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	SLC35A2	P78381	396 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	SCGB2A2	Q13296	93 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	ZNF273	Q14593	569 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	INSL4	Q14641	139 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	GPR157	Q5UAW9	335 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	METAP1D	Q6UB28	335 aa	Predicted RBP	11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	UNQ9370/PRO34162	Q6UXP9	181 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	LYPD6	Q86Y78	171 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	SAXO1	Q8IYX7	474 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	STX19	Q8N4C7	294 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	OR4S1	Q8NGB4	309 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	C17orf50	Q8WW18	174 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	CDCA4	Q9BXL8	241 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	ANKRD60	Q9BZ19	345 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	FAM234A	Q9H0X4	552 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	ZNF581	Q9P0T4	197 aa		11.17	□□□□□ -0.62
RAB5A-208	ENST00000476544	TRBV23-1	A0A0A0MS06	115 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544		A0A0G2JK05	382 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544		A0A1W2PPK0	400 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544		A0A1W2PRD5	423 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544		A0A1W2PRF3	423 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544		A0A1W2PRM7	423 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	TMEM89	A2RUT3	159 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	MAGEA13P	A6NCF6	341 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	CLDN34	H7C241	214 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544		M0R1W7	72 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	ATP6V1G2	O95670	118 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	HAND1	O96004	215 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	ALDOB	P05062	364 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	CD1A	P06126	327 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	LMO1	P25800	156 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	CAPZA1	P52907	286 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	RPL31	P62899	125 aa	Known RBP	11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	BAMBI	Q13145	260 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	EMG1	Q92979	244 aa	Known RBP	11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	TMEM106A	Q96A25	262 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	SNX22	Q96L94	193 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	VCX	Q9H320	206 aa		11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	CHCHD3	Q9NX63	227 aa	Known RBP	11.16	□□□□□ -0.62
RAB5A-208	ENST00000476544	PNMA8C	A0A1B0GUJ8	204 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	C17orf98	A8MV24	154 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	TRIM77	I1YAP6	450 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	GABRP	O00591	440 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	HOXA3	O43365	443 aa	Predicted RBP	11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	OR2H2	O95918	312 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	MELTF	P08582	738 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	OCM2	P0CE71	109 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	TMEM225B	P0DP42	221 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	PRKACA	P17612	351 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	CEL	P19835	753 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	RAB3A	P20336	220 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	OR3A1	P47881	315 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	SNU13	P55769	128 aa	Known RBP	11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	WNT4	P56705	351 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	ACSM1	Q08AH1	577 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	LDLRAD2	Q5SZI1	272 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	ELP2	Q6IA86	826 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	IZUMO2	Q6UXV1	221 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	FAM185A	Q8N0U4	392 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	TPRX1	Q8N7U7	411 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	PXT1	Q8NFP0	134 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	TSEN15	Q8WW01	171 aa	Known RBP	11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	PPIL3	Q9H2H8	161 aa	Known RBP	11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	METTL8	Q9H825	291 aa	Known RBP	11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	GSTK1	Q9Y2Q3	226 aa		11.15	□□□□□ -0.62
RAB5A-208	ENST00000476544	DOCK11	Q5JSL3	2073 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544		A0A1W2PQ09	198 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544		H0YHG0	523 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	CDRT1	O95170	752 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	HCK	P08631	526 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	CRHBP	P24387	322 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	TGFBR2	P37173	567 aa		11.14	□□□□□ -0.63
RAB5A-208	ENST00000476544	PTGFR	P43088	359 aa		11.14	□□□□□ -0.63

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