RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 CDK5R1Q15078 307 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 CCDC58Q4VC31 144 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 OR2G6Q5TZ20 316 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 RPL22L1Q6P5R6 122 aaKnown RBP13.26□□□□□ -0.29
COL1A1-205ENST00000476387 C17orf107Q6ZR85 190 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 FAM58AQ8N1B3 248 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 PIP4P2Q8N4L2 257 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 OR5D13Q8NGL4 314 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 CPNE2Q96FN4 548 aaPredicted RBP13.26□□□□□ -0.29
COL1A1-205ENST00000476387 TMEM80Q96HE8 168 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 SPACA5Q96QH8 159 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 DPAGT1Q9H3H5 408 aa13.26□□□□□ -0.29
COL1A1-205ENST00000476387 hCG_1809904A0A1W2PP81 198 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 A0A1W2PPE2 198 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 A0A1W2PR64 198 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 A0A1W2PRV1 198 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 EFCAB10A6NFE3 127 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 RNASEK-C17orf49H0YIS7 233 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 K7N7A8 449 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 SULT1B1O43704 296 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 HAND1O96004 215 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 CD2P06729 351 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 GNAO1P09471 354 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 PRKACAP17612 351 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 BCL3P20749 454 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 PRB3Q04118 309 aaPredicted RBP13.25□□□□□ -0.29
COL1A1-205ENST00000476387 PDZK1IP1Q13113 114 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 GDPD3Q7L5L3 318 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 PARP16Q8N5Y8 322 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 OR4M1Q8NGD0 313 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 OR5D18Q8NGL1 313 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 GPR148Q8TDV2 347 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 RBFOX1Q9NWB1 397 aaKnown RBP13.25□□□□□ -0.29
COL1A1-205ENST00000476387 GLS2Q9UI32 602 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 PCDHGB5Q9Y5G0 923 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 WNK1Q9H4A3 2382 aa13.25□□□□□ -0.29
COL1A1-205ENST00000476387 A0A1W2PRD5 423 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 A0A1W2PRF3 423 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 A0A1W2PRM7 423 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 ERICH4A6NGS2 130 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 NPFFO15130 113 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 MAGEB3O15480 346 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 GPR137BO60478 399 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 PAHP00439 452 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 IGHV4-59P01825 116 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 FBP1P09467 338 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 PIPP12273 146 aaPredicted RBP13.24□□□□□ -0.29
COL1A1-205ENST00000476387 NPBWR2P48146 333 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 SOX2P48431 317 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 SNU13P55769 128 aaKnown RBP13.24□□□□□ -0.29
COL1A1-205ENST00000476387 DLX1P56177 255 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 EDDM3BP56851 147 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 SLC34A1Q06495 639 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 ST3GAL4Q11206 333 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 SPIN3Q5JUX0 258 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 OR8H2Q8N162 312 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 OR52N1Q8NH53 320 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 CITED1Q99966 193 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 CNOT2Q9NZN8 540 aaKnown RBP13.24□□□□□ -0.29
COL1A1-205ENST00000476387 IL36RNQ9UBH0 155 aa13.24□□□□□ -0.29
COL1A1-205ENST00000476387 ANGPTL7O43827 346 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 ZNF737O75373 536 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 ALX3O95076 343 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 RAB3AP20336 220 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 GABRR1P24046 479 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 UBE2E1P51965 193 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 XAF1Q6GPH4 301 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 GDPGP1Q6ZNW5 385 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 AHSA2Q719I0 299 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 SAXO1Q8IYX7 474 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 STX19Q8N4C7 294 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 ZSCAN4Q8NAM6 433 aaPredicted RBP13.23□□□□□ -0.29
COL1A1-205ENST00000476387 GGHQ92820 318 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 TNFRSF14Q92956 283 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 SMIM19Q96E16 107 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 SNX22Q96L94 193 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 BABAM2Q9NXR7 383 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 ZNRD1Q9P1U0 126 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 NKX1-2Q9UD57 310 aaPredicted RBP13.23□□□□□ -0.29
COL1A1-205ENST00000476387 CLEC2DQ9UHP7 191 aa13.23□□□□□ -0.29
COL1A1-205ENST00000476387 SF3B6Q9Y3B4 125 aaKnown RBP13.23□□□□□ -0.29
COL1A1-205ENST00000476387 MEIOCA2RUB1 952 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 BTBD17A6NE02 478 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 MYL12BO14950 172 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 XPNPEP2O43895 674 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 KDM4BO94953 1096 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 TMEM225BP0DP42 221 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 CALCBP10092 127 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 DUSP1P28562 367 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 SAA4P35542 130 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 ERVFRD-1P60508 538 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 ACSM1Q08AH1 577 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 EDDM3AQ14507 147 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 ZNF273Q14593 569 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 ZNF146Q15072 292 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 KISS1Q15726 138 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 GRK1Q15835 563 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 TMEM200BQ69YZ2 307 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 BPIFB6Q8NFQ5 453 aa13.22□□□□□ -0.29
COL1A1-205ENST00000476387 PPP1R35Q8TAP8 253 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms