RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 C1QL2Q7Z5L3 287 aa24.54■■□□□ 1.52
HOXB3-208ENST00000476342 ZNRF1Q8ND25 227 aa24.54■■□□□ 1.52
HOXB3-208ENST00000476342 TMEM185AQ8NFB2 350 aa24.54■■□□□ 1.52
HOXB3-208ENST00000476342 UQCC2Q9BRT2 126 aa24.54■■□□□ 1.52
HOXB3-208ENST00000476342 ING4Q9UNL4 249 aa24.54■■□□□ 1.52
HOXB3-208ENST00000476342 INAFM1C9JVW0 142 aa24.53■■□□□ 1.52
HOXB3-208ENST00000476342 CHRM2P08172 466 aa24.53■■□□□ 1.52
HOXB3-208ENST00000476342 SELLP14151 372 aa24.53■■□□□ 1.52
HOXB3-208ENST00000476342 CEBPDP49716 269 aaPredicted RBP24.53■■□□□ 1.52
HOXB3-208ENST00000476342 CR1LQ2VPA4 569 aa24.53■■□□□ 1.52
HOXB3-208ENST00000476342 ELP2Q6IA86 826 aa24.53■■□□□ 1.52
HOXB3-208ENST00000476342 FAHD2BQ6P2I3 314 aaPredicted RBP24.53■■□□□ 1.52
HOXB3-208ENST00000476342 BTNL3Q6UXE8 466 aa24.53■■□□□ 1.52
HOXB3-208ENST00000476342 LRRTM1Q86UE6 522 aa24.53■■□□□ 1.52
HOXB3-208ENST00000476342 RAB40AQ8WXH6 277 aa24.53■■□□□ 1.52
HOXB3-208ENST00000476342 FAHD2AQ96GK7 314 aa24.53■■□□□ 1.52
HOXB3-208ENST00000476342 CNTD2Q9H8S5 307 aa24.53■■□□□ 1.52
HOXB3-208ENST00000476342 SEBOXQ9HB31 216 aaPredicted RBP24.53■■□□□ 1.52
HOXB3-208ENST00000476342 PCDHB16Q9NRJ7 776 aa24.53■■□□□ 1.52
HOXB3-208ENST00000476342 IL36GQ9NZH8 169 aa24.53■■□□□ 1.52
HOXB3-208ENST00000476342 IL36RNQ9UBH0 155 aa24.53■■□□□ 1.52
HOXB3-208ENST00000476342 GSTK1Q9Y2Q3 226 aa24.53■■□□□ 1.52
HOXB3-208ENST00000476342 J3QLI3 93 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 ZNF780AO75290 641 aaPredicted RBP24.52■■□□□ 1.52
HOXB3-208ENST00000476342 CDRT1O95170 752 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 CALCBP10092 127 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 ADRA2CP18825 462 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 CAPZA1P52907 286 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 CAV3P56539 151 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 FGF12P61328 243 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 MMP26Q9NRE1 261 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 STUB1Q9UNE7 303 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 MRPS28Q9Y2Q9 187 aaKnown RBP24.52■■□□□ 1.52
HOXB3-208ENST00000476342 SVEP1Q4LDE5 3571 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 IGHV2-70DA0A0C4DH43 119 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 ENSAO43768 121 aaKnown RBP24.52■■□□□ 1.52
HOXB3-208ENST00000476342 FCN3O75636 299 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 HAND1O96004 215 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 CSTBP04080 98 aaKnown RBP24.52■■□□□ 1.52
HOXB3-208ENST00000476342 HNF1AP20823 631 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 SNU13P55769 128 aaKnown RBP24.52■■□□□ 1.52
HOXB3-208ENST00000476342 AWAT2Q6E213 333 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 BTN2A1Q7KYR7 527 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 NUDT16L1Q9BRJ7 211 aaKnown RBP24.52■■□□□ 1.52
HOXB3-208ENST00000476342 INSIG2Q9Y5U4 225 aa24.52■■□□□ 1.52
HOXB3-208ENST00000476342 TRIM64CA6NLI5 447 aa24.51■■□□□ 1.51
HOXB3-208ENST00000476342 NDUFB7P17568 137 aa24.51■■□□□ 1.51
HOXB3-208ENST00000476342 PAX2Q02962 417 aa24.51■■□□□ 1.51
HOXB3-208ENST00000476342 COL10A1Q03692 680 aa24.51■■□□□ 1.51
HOXB3-208ENST00000476342 GPR176Q14439 515 aa24.51■■□□□ 1.51
HOXB3-208ENST00000476342 LYPD6Q86Y78 171 aa24.51■■□□□ 1.51
HOXB3-208ENST00000476342 ASCC1Q8N9N2 400 aaKnown RBP24.51■■□□□ 1.51
HOXB3-208ENST00000476342 OR10K1Q8NGX5 313 aa24.51■■□□□ 1.51
HOXB3-208ENST00000476342 FAM234AQ9H0X4 552 aa24.51■■□□□ 1.51
HOXB3-208ENST00000476342 EXOSC4Q9NPD3 245 aaKnown RBP24.51■■□□□ 1.51
HOXB3-208ENST00000476342 LPAR3Q9UBY5 353 aa24.51■■□□□ 1.51
HOXB3-208ENST00000476342 METRNQ9UJH8 293 aa24.51■■□□□ 1.51
HOXB3-208ENST00000476342 C22orf46C9J442 243 aa24.5■■□□□ 1.51
HOXB3-208ENST00000476342 SH2D1BO14796 132 aa24.5■■□□□ 1.51
HOXB3-208ENST00000476342 HTR3BO95264 441 aa24.5■■□□□ 1.51
HOXB3-208ENST00000476342 MYL9P24844 172 aa24.5■■□□□ 1.51
HOXB3-208ENST00000476342 GLIPR1L1Q6UWM5 242 aa24.5■■□□□ 1.51
HOXB3-208ENST00000476342 FGFRL1Q8N441 504 aa24.5■■□□□ 1.51
HOXB3-208ENST00000476342 Q8NFD4 153 aa24.5■■□□□ 1.51
HOXB3-208ENST00000476342 H1FXQ92522 213 aaKnown RBP24.5■■□□□ 1.51
HOXB3-208ENST00000476342 SHARPINQ9H0F6 387 aa24.5■■□□□ 1.51
HOXB3-208ENST00000476342 CDC42EP3Q9UKI2 254 aa24.5■■□□□ 1.51
HOXB3-208ENST00000476342 SSR3Q9UNL2 185 aa24.5■■□□□ 1.51
HOXB3-208ENST00000476342 SERPINA2P20848 420 aa24.49■■□□□ 1.51
HOXB3-208ENST00000476342 DUSP1P28562 367 aa24.49■■□□□ 1.51
HOXB3-208ENST00000476342 FAM120AOSQ5T036 256 aa24.49■■□□□ 1.51
HOXB3-208ENST00000476342 OR4D6Q8NGJ1 314 aa24.49■■□□□ 1.51
HOXB3-208ENST00000476342 DACT3Q96B18 629 aaPredicted RBP24.49■■□□□ 1.51
HOXB3-208ENST00000476342 MRI1Q9BV20 369 aa24.49■■□□□ 1.51
HOXB3-208ENST00000476342 C7orf69Q9H7B7 122 aa24.49■■□□□ 1.51
HOXB3-208ENST00000476342 KIR2DS1A0A191URI9 304 aa24.48■■□□□ 1.51
HOXB3-208ENST00000476342 LIPFP07098 398 aa24.48■■□□□ 1.51
HOXB3-208ENST00000476342 CD36P16671 472 aa24.48■■□□□ 1.51
HOXB3-208ENST00000476342 FGF9P31371 208 aaPredicted RBP24.48■■□□□ 1.51
HOXB3-208ENST00000476342 C22orf42Q6IC83 251 aa24.48■■□□□ 1.51
HOXB3-208ENST00000476342 OR51T1Q8NGJ9 327 aa24.48■■□□□ 1.51
HOXB3-208ENST00000476342 TBC1D15Q8TC07 691 aa24.48■■□□□ 1.51
HOXB3-208ENST00000476342 TMPRSS13Q9BYE2 586 aa24.48■■□□□ 1.51
HOXB3-208ENST00000476342 GHRLQ9UBU3 117 aa24.48■■□□□ 1.51
HOXB3-208ENST00000476342 RPUSD1Q9UJJ7 312 aaKnown RBP24.48■■□□□ 1.51
HOXB3-208ENST00000476342 FN1P02751 2386 aaKnown RBP24.47■■□□□ 1.51
HOXB3-208ENST00000476342 TRAV1-2A0A0B4J238 106 aa24.47■■□□□ 1.51
HOXB3-208ENST00000476342 TK1P04183 234 aa24.47■■□□□ 1.51
HOXB3-208ENST00000476342 JUNBP17275 347 aaPredicted RBP24.47■■□□□ 1.51
HOXB3-208ENST00000476342 PSMD7P51665 324 aa24.47■■□□□ 1.51
HOXB3-208ENST00000476342 IL13RA2Q14627 380 aa24.47■■□□□ 1.51
HOXB3-208ENST00000476342 SLC22A6Q4U2R8 563 aa24.47■■□□□ 1.51
HOXB3-208ENST00000476342 OSR2Q8N2R0 312 aa24.47■■□□□ 1.51
HOXB3-208ENST00000476342 TEX29Q8N6K0 151 aa24.47■■□□□ 1.51
HOXB3-208ENST00000476342 PPP1R35Q8TAP8 253 aa24.47■■□□□ 1.51
HOXB3-208ENST00000476342 SNX22Q96L94 193 aa24.47■■□□□ 1.51
HOXB3-208ENST00000476342 DCTN5Q9BTE1 182 aa24.47■■□□□ 1.51
HOXB3-208ENST00000476342 K7N7A8 449 aa24.46■■□□□ 1.51
HOXB3-208ENST00000476342 PDCD5O14737 125 aa24.46■■□□□ 1.51
HOXB3-208ENST00000476342 ZNF737O75373 536 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms