RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 CDK5Q00535 292 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 GK3PQ14409 553 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 TMEM236Q5W0B7 351 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 OR52W1Q6IF63 320 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 BAIAP2L2Q6UXY1 529 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 ELMOD2Q8IZ81 293 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 OR52N4Q8NGI2 321 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 OR52A1Q9UKL2 312 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 R4GMQ9 66 aa16.26■□□□□ 0.19
VPS36-203ENST00000475375 A0A1B0GTI1 187 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 H3BSH0 61 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 M0QZK8 103 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 MAGEB4O15481 346 aaPredicted RBP16.25■□□□□ 0.19
VPS36-203ENST00000475375 E2F6O75461 281 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 AMY1AP04745 511 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 AMY2AP04746 511 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 CEACAM3P40198 252 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 RPL23AP62750 156 aaKnown RBP16.25■□□□□ 0.19
VPS36-203ENST00000475375 BDH1Q02338 343 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 ODF4Q2M2E3 257 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 ZNF322Q6U7Q0 402 aaPredicted RBP16.25■□□□□ 0.19
VPS36-203ENST00000475375 PLEKHG7Q6ZR37 379 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 C8orf86Q6ZUL3 223 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 SLC25A26Q70HW3 274 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 RTN4RL2Q86UN3 420 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 CNN2Q99439 309 aaKnown RBP16.25■□□□□ 0.19
VPS36-203ENST00000475375 GAL3ST2Q9H3Q3 398 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 TVP23BQ9NYZ1 205 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 GLS2Q9UI32 602 aa16.25■□□□□ 0.19
VPS36-203ENST00000475375 CCDC182A6NF36 153 aa16.24■□□□□ 0.19
VPS36-203ENST00000475375 DHRS7CA6NNS2 312 aa16.24■□□□□ 0.19
VPS36-203ENST00000475375 MGST3O14880 152 aa16.24■□□□□ 0.19
VPS36-203ENST00000475375 PSPNO60542 156 aa16.24■□□□□ 0.19
VPS36-203ENST00000475375 RAP2AP10114 183 aa16.24■□□□□ 0.19
VPS36-203ENST00000475375 DUSP1P28562 367 aa16.24■□□□□ 0.19
VPS36-203ENST00000475375 SNU13P55769 128 aaKnown RBP16.24■□□□□ 0.19
VPS36-203ENST00000475375 CXCR4P61073 352 aa16.24■□□□□ 0.19
VPS36-203ENST00000475375 ACTR3P61158 418 aa16.24■□□□□ 0.19
VPS36-203ENST00000475375 C18orf65Q6ZTR6 163 aa16.24■□□□□ 0.19
VPS36-203ENST00000475375 OR2W3Q7Z3T1 314 aa16.24■□□□□ 0.19
VPS36-203ENST00000475375 ENTHD1Q8IYW4 607 aa16.24■□□□□ 0.19
VPS36-203ENST00000475375 IL36RNQ9UBH0 155 aa16.24■□□□□ 0.19
VPS36-203ENST00000475375 UBE2J1Q9Y385 318 aaPredicted RBP16.24■□□□□ 0.19
VPS36-203ENST00000475375 IGKV1-27A0A075B6S5 117 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 TRGV10A0A0A0MS01 117 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 H0YHG0 523 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 TOR1AO14656 332 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 SNX3O60493 162 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 SRSF10O75494 262 aaKnown RBP16.23■□□□□ 0.19
VPS36-203ENST00000475375 CDK2P24941 298 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 MNDAP41218 407 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 P2RX3P56373 397 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 RAB25P57735 213 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 RBM39Q14498 530 aaKnown RBP16.23■□□□□ 0.19
VPS36-203ENST00000475375 KLHL22Q53GT1 634 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 TMEM179BQ7Z7N9 219 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 KLHL30-AS1Q8NEE0 82 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 LRGUKQ96M69 825 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 ZNF446Q9NWS9 450 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 MOB4Q9Y3A3 225 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 SNX5Q9Y5X3 404 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 HSPE1-MOB4S4R3N1 261 aa16.23■□□□□ 0.19
VPS36-203ENST00000475375 C3orf84H3BNL1 204 aa16.22■□□□□ 0.19
VPS36-203ENST00000475375 CALCBP10092 127 aa16.22■□□□□ 0.19
VPS36-203ENST00000475375 MYCNOSP40205 109 aa16.22■□□□□ 0.19
VPS36-203ENST00000475375 OR3A4PP47883 348 aa16.22■□□□□ 0.19
VPS36-203ENST00000475375 MNAT1P51948 309 aa16.22■□□□□ 0.19
VPS36-203ENST00000475375 FUT6P51993 359 aa16.22■□□□□ 0.19
VPS36-203ENST00000475375 ZNF91Q05481 1191 aa16.22■□□□□ 0.19
VPS36-203ENST00000475375 KPNB1Q14974 876 aaKnown RBP16.22■□□□□ 0.19
VPS36-203ENST00000475375 UBE2V2Q15819 145 aa16.22■□□□□ 0.19
VPS36-203ENST00000475375 TPTE2P1Q5T6R2 138 aa16.22■□□□□ 0.19
VPS36-203ENST00000475375 Q8IYB0 196 aa16.22■□□□□ 0.19
VPS36-203ENST00000475375 CREB3L1Q96BA8 519 aa16.22■□□□□ 0.19
VPS36-203ENST00000475375 BORCS8Q96FH0 119 aa16.22■□□□□ 0.19
VPS36-203ENST00000475375 RBFOX1Q9NWB1 397 aaKnown RBP16.22■□□□□ 0.19
VPS36-203ENST00000475375 HHLA2Q9UM44 414 aa16.22■□□□□ 0.19
VPS36-203ENST00000475375 SIRPB1O00241 398 aa16.21■□□□□ 0.19
VPS36-203ENST00000475375 GATBO75879 557 aaKnown RBP16.21■□□□□ 0.19
VPS36-203ENST00000475375 RPP14O95059 124 aaKnown RBP16.21■□□□□ 0.19
VPS36-203ENST00000475375 CYB5AP00167 134 aa16.21■□□□□ 0.19
VPS36-203ENST00000475375 FAM106CPP0CH98 169 aa16.21■□□□□ 0.19
VPS36-203ENST00000475375 PRKACAP17612 351 aa16.21■□□□□ 0.19
VPS36-203ENST00000475375 OR3A1P47881 315 aa16.21■□□□□ 0.19
VPS36-203ENST00000475375 TRIM25Q14258 630 aaKnown RBP16.21■□□□□ 0.19
VPS36-203ENST00000475375 CCDC144NLQ6NUI1 221 aa16.21■□□□□ 0.19
VPS36-203ENST00000475375 HEPN1Q6WQI6 88 aa16.21■□□□□ 0.19
VPS36-203ENST00000475375 SLC35F2Q8IXU6 374 aa16.21■□□□□ 0.19
VPS36-203ENST00000475375 HS3ST5Q8IZT8 346 aa16.21■□□□□ 0.19
VPS36-203ENST00000475375 FAM58AQ8N1B3 248 aa16.21■□□□□ 0.19
VPS36-203ENST00000475375 CHPT1Q8WUD6 406 aa16.21■□□□□ 0.19
VPS36-203ENST00000475375 NOL4LQ96MY1 436 aaPredicted RBP16.21■□□□□ 0.19
VPS36-203ENST00000475375 DUX3Q96PT4 197 aa16.21■□□□□ 0.19
VPS36-203ENST00000475375 ZNF286AQ9HBT8 521 aa16.21■□□□□ 0.19
VPS36-203ENST00000475375 SLC25A19Q9HC21 320 aa16.21■□□□□ 0.19
VPS36-203ENST00000475375 ZNF670-ZNF695F2Z2N8 137 aa16.2■□□□□ 0.18
VPS36-203ENST00000475375 BUB1B-PAK6H3BSN5 160 aa16.2■□□□□ 0.18
VPS36-203ENST00000475375 SYT7O43581 403 aa16.2■□□□□ 0.18
VPS36-203ENST00000475375 RAMP3O60896 148 aa16.2■□□□□ 0.18
VPS36-203ENST00000475375 IGLV1-47P01700 117 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms