RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 KLHL22Q53GT1 634 aa13.26□□□□□ -0.29
CPA4-205ENST00000474254 OR8H2Q8N162 312 aa13.26□□□□□ -0.29
CPA4-205ENST00000474254 ZNF555Q8NEP9 628 aa13.26□□□□□ -0.29
CPA4-205ENST00000474254 JAM3Q9BX67 310 aa13.26□□□□□ -0.29
CPA4-205ENST00000474254 RBFOX1Q9NWB1 397 aaKnown RBP13.26□□□□□ -0.29
CPA4-205ENST00000474254 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.26□□□□□ -0.29
CPA4-205ENST00000474254 VPREB3Q9UKI3 123 aa13.26□□□□□ -0.29
CPA4-205ENST00000474254 SF3B6Q9Y3B4 125 aaKnown RBP13.26□□□□□ -0.29
CPA4-205ENST00000474254 hCG_1809904A0A1W2PP81 198 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 A0A1W2PPE2 198 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 A0A1W2PR64 198 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 A0A1W2PRV1 198 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 E9PI62 339 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 INMTO95050 263 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 ZFPL1O95159 310 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 HAND1O96004 215 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 CYB5AP00167 134 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 RPSAP08865 295 aaKnown RBP13.25□□□□□ -0.29
CPA4-205ENST00000474254 CCDC159P0C7I6 412 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 LIMS3P0CW19 117 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 LIMS4P0CW20 117 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 PIPP12273 146 aaPredicted RBP13.25□□□□□ -0.29
CPA4-205ENST00000474254 BCL3P20749 454 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 NPBWR2P48146 333 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 DLX6P56179 175 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 PDZK1IP1Q13113 114 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 ZNF146Q15072 292 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 C2orf68Q2NKX9 166 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 ZNF691Q5VV52 312 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 FAM58AQ8N1B3 248 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 ZSCAN4Q8NAM6 433 aaPredicted RBP13.25□□□□□ -0.29
CPA4-205ENST00000474254 BEND2Q8NDZ0 799 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 OR13C9Q8NGT0 318 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 HAVCR2Q8TDQ0 301 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 AJUBAQ96IF1 538 aa13.25□□□□□ -0.29
CPA4-205ENST00000474254 FGF20Q9NP95 211 aaPredicted RBP13.25□□□□□ -0.29
CPA4-205ENST00000474254 TMEM82A0PJX8 343 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 C17orf98A8MV24 154 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 RBP4P02753 201 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 OCM2P0CE71 109 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 OCMP0CE72 109 aaPredicted RBP13.24□□□□□ -0.29
CPA4-205ENST00000474254 ERVFRD-1P60508 538 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 SPIN3Q5JUX0 258 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 CRIP3Q6Q6R5 217 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 Q6ZSV7 163 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 GDPD3Q7L5L3 318 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 TCF23Q7RTU1 214 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 PARP16Q8N5Y8 322 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 PACRGLQ8N7B6 248 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 OR5R1Q8NH85 324 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 OR5AK2Q8NH90 309 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 FAM110DQ8TAY7 271 aaPredicted RBP13.24□□□□□ -0.29
CPA4-205ENST00000474254 C17orf50Q8WW18 174 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 RFT1Q96AA3 541 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 SNX22Q96L94 193 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 SPACA5Q96QH8 159 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 PDCD1LG2Q9BQ51 273 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 COMMD4Q9H0A8 199 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 ZCCHC4Q9H5U6 513 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 C16orf95Q9H693 158 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 HEXA-AS1Q9H8Q6 139 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 C8orf4Q9NR00 106 aa13.24□□□□□ -0.29
CPA4-205ENST00000474254 TET2Q6N021 2002 aaPredicted RBP13.23□□□□□ -0.29
CPA4-205ENST00000474254 IGKV1-12A0A0C4DH73 117 aa13.23□□□□□ -0.29
CPA4-205ENST00000474254 ALX3O95076 343 aa13.23□□□□□ -0.29
CPA4-205ENST00000474254 CLIC3O95833 236 aa13.23□□□□□ -0.29
CPA4-205ENST00000474254 TSPAN15O95858 294 aa13.23□□□□□ -0.29
CPA4-205ENST00000474254 IGKV1D-12P01611 117 aa13.23□□□□□ -0.29
CPA4-205ENST00000474254 PRKACAP17612 351 aa13.23□□□□□ -0.29
CPA4-205ENST00000474254 PEX2P28328 305 aa13.23□□□□□ -0.29
CPA4-205ENST00000474254 GBX2P52951 348 aaPredicted RBP13.23□□□□□ -0.29
CPA4-205ENST00000474254 EDDM3BP56851 147 aa13.23□□□□□ -0.29
CPA4-205ENST00000474254 MEF2CQ06413 473 aaPredicted RBP13.23□□□□□ -0.29
CPA4-205ENST00000474254 RCN1Q15293 331 aa13.23□□□□□ -0.29
CPA4-205ENST00000474254 LRRC36Q1X8D7 754 aa13.23□□□□□ -0.29
CPA4-205ENST00000474254 ZNF782Q6ZMW2 699 aaPredicted RBP13.23□□□□□ -0.29
CPA4-205ENST00000474254 RNF144BQ7Z419 303 aa13.23□□□□□ -0.29
CPA4-205ENST00000474254 CNIH3Q8TBE1 160 aa13.23□□□□□ -0.29
CPA4-205ENST00000474254 NEK6Q9HC98 313 aa13.23□□□□□ -0.29
CPA4-205ENST00000474254 HMG20AQ9NP66 347 aa13.23□□□□□ -0.29
CPA4-205ENST00000474254 SULT1B1O43704 296 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 PSPNO60542 156 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 KDM4BO94953 1096 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 ZNF728P0DKX0 622 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 COX7A1P24310 79 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 DCKP27707 260 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 DUSP1P28562 367 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 TGFBR2P37173 567 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 BMXP51813 675 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 EDDM3AQ14507 147 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 TTC23Q5W5X9 447 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 C1QL4Q86Z23 238 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 SERPINA12Q8IW75 414 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 SAXO1Q8IYX7 474 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 OR52N4Q8NGI2 321 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 OR5D18Q8NGL1 313 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 RPS4Y2Q8TD47 263 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 TSEN15Q8WW01 171 aaKnown RBP13.22□□□□□ -0.29
CPA4-205ENST00000474254 CYGBQ8WWM9 190 aa13.22□□□□□ -0.29
CPA4-205ENST00000474254 RGP1Q92546 391 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms