RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 CYB5AP00167 134 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 PAHP00439 452 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 MT-ND2P03891 347 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 CCDC159P0C7I6 412 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 DUSP1P28562 367 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 ETV1P50549 477 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 DLX6P56179 175 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 EDDM3BP56851 147 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 OR2G6Q5TZ20 316 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 TTC23Q5W5X9 447 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 SHISA2Q6UWI4 295 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 ZNF782Q6ZMW2 699 aaPredicted RBP14.62□□□□□ -0.07
UPF3A-203ENST00000474056 OR8H2Q8N162 312 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 PACRGLQ8N7B6 248 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 OR52N4Q8NGI2 321 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 TSEN15Q8WW01 171 aaKnown RBP14.62□□□□□ -0.07
UPF3A-203ENST00000474056 DHDHQ9UQ10 334 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 MMP24Q9Y5R2 645 aa14.62□□□□□ -0.07
UPF3A-203ENST00000474056 POM121CA8CG34 1229 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 PSPNO60542 156 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 NDUFA7O95182 113 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 COX7A1P24310 79 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 DCKP27707 260 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 BMXP51813 675 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 RPL15P61313 204 aaKnown RBP14.61□□□□□ -0.07
UPF3A-203ENST00000474056 ADARB1P78563 741 aaKnown RBP14.61□□□□□ -0.07
UPF3A-203ENST00000474056 EDDM3AQ14507 147 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 ZNF146Q15072 292 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 GDPD3Q7L5L3 318 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 TCF23Q7RTU1 214 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 DHRSXQ8N5I4 330 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 PARP16Q8N5Y8 322 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 TPRX1Q8N7U7 411 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 OR4F5Q8NH21 305 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 SGMS2Q8NHU3 365 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 RGP1Q92546 391 aaPredicted RBP14.61□□□□□ -0.07
UPF3A-203ENST00000474056 AJUBAQ96IF1 538 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 CHST6Q9GZX3 395 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 HEXA-AS1Q9H8Q6 139 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 SEBOXQ9HB31 216 aaPredicted RBP14.61□□□□□ -0.07
UPF3A-203ENST00000474056 C8orf4Q9NR00 106 aa14.61□□□□□ -0.07
UPF3A-203ENST00000474056 C17orf98A8MV24 154 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 SULT1B1O43704 296 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 KDM4BO94953 1096 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 HCKP08631 526 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 PAX6P26367 422 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 CDK5R1Q15078 307 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 GRK1Q15835 563 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 MIDNQ504T8 468 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 SERPINA12Q8IW75 414 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 BEND2Q8NDZ0 799 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 SETD9Q8NE22 299 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 HAVCR2Q8TDQ0 301 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 BEX1Q9HBH7 125 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 NEK6Q9HC98 313 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 HMG20AQ9NP66 347 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 VPREB3Q9UKI3 123 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 GSTK1Q9Y2Q3 226 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 NBEAL1Q6ZS30 2694 aa14.6□□□□□ -0.07
UPF3A-203ENST00000474056 A0A1B0GUS0 222 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 hCG_1809904A0A1W2PP81 198 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 A0A1W2PPE2 198 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 A0A1W2PR64 198 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 A0A1W2PRV1 198 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 BTBD17A6NE02 478 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 ALX3O95076 343 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 ZNF728P0DKX0 622 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 GABRR1P24046 479 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 SOX2P48431 317 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 ZP1P60852 638 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 IL18R1Q13478 541 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 SPIN3Q5JUX0 258 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 OGFRL1Q5TC84 451 aaPredicted RBP14.59□□□□□ -0.07
UPF3A-203ENST00000474056 OLFML2AQ68BL7 652 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 ASPHD2Q6ICH7 369 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 GDPGP1Q6ZNW5 385 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 OR4S1Q8NGB4 309 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 OR5D14Q8NGL3 314 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 RPS4Y2Q8TD47 263 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 SLITRK2Q9H156 845 aa14.59□□□□□ -0.07
UPF3A-203ENST00000474056 DIMT1Q9UNQ2 313 aaKnown RBP14.59□□□□□ -0.07
UPF3A-203ENST00000474056 IRGMA1A4Y4 181 aa14.58□□□□□ -0.08
UPF3A-203ENST00000474056 SIRPB1O00241 398 aa14.58□□□□□ -0.08
UPF3A-203ENST00000474056 CASQ2O14958 399 aaPredicted RBP14.58□□□□□ -0.08
UPF3A-203ENST00000474056 OR2H2O95918 312 aa14.58□□□□□ -0.08
UPF3A-203ENST00000474056 RPSAP08865 295 aaKnown RBP14.58□□□□□ -0.08
UPF3A-203ENST00000474056 OR3A1P47881 315 aa14.58□□□□□ -0.08
UPF3A-203ENST00000474056 SRSF4Q08170 494 aaKnown RBP14.58□□□□□ -0.08
UPF3A-203ENST00000474056 KISS1Q15726 138 aa14.58□□□□□ -0.08
UPF3A-203ENST00000474056 CCDC58Q4VC31 144 aa14.58□□□□□ -0.08
UPF3A-203ENST00000474056 RPL22L1Q6P5R6 122 aaKnown RBP14.58□□□□□ -0.08
UPF3A-203ENST00000474056 OR51A2Q8NGJ7 313 aa14.58□□□□□ -0.08
UPF3A-203ENST00000474056 WFDC12Q8WWY7 111 aa14.58□□□□□ -0.08
UPF3A-203ENST00000474056 ZNF714Q96N38 554 aa14.58□□□□□ -0.08
UPF3A-203ENST00000474056 SSX3Q99909 188 aa14.58□□□□□ -0.08
UPF3A-203ENST00000474056 EXOSC4Q9NPD3 245 aaKnown RBP14.58□□□□□ -0.08
UPF3A-203ENST00000474056 CLEC2DQ9UHP7 191 aa14.58□□□□□ -0.08
UPF3A-203ENST00000474056 GLS2Q9UI32 602 aa14.58□□□□□ -0.08
UPF3A-203ENST00000474056 EXOSC1Q9Y3B2 195 aaKnown RBP14.58□□□□□ -0.08
UPF3A-203ENST00000474056 SIRT4Q9Y6E7 314 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms