RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 PLEKHA6Q9Y2H5 1048 aa8.69□□□□□ -1.02
PRPF38A-202ENST00000474048 TRAV38-1A0A0B4J264 116 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 SRRM5B3KS81 715 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 GABARAPH6UMI1 98 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 H7C1Q1 480 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 SULT1C2O00338 296 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 CTDSPLO15194 276 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 NOS1APO75052 506 aaPredicted RBP8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 UPK1BO75841 260 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 RBBP9O75884 186 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 ECDO95905 644 aaPredicted RBP8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 HAND1O96004 215 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 LPLP06858 475 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 CSF1P09603 554 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 GNB3P16520 340 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 GABRA2P47869 451 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 PLA2G7Q13093 441 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 CARTPTQ16568 116 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 PAN3Q58A45 887 aaKnown RBP8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 MZT2BQ6NZ67 158 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 ACP7Q6ZNF0 438 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 TRAPPC6BQ86SZ2 158 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 DTX2Q86UW9 622 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 TOMM5Q8N4H5 51 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 ASCC1Q8N9N2 400 aaKnown RBP8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 Q8TCH9 128 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 SMIM4Q8WVI0 70 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 ARHGAP5-AS1Q96IT6 56 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 COX4I2Q96KJ9 171 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 THAP7Q9BT49 309 aaPredicted RBP8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 TRAF4Q9BUZ4 470 aaPredicted RBP8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 SRRQ9GZT4 340 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 AUNIPQ9H7T9 357 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 DLL4Q9NR61 685 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 ZNF701Q9NV72 531 aaPredicted RBP8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 NLKQ9UBE8 527 aa8.68□□□□□ -1.02
PRPF38A-202ENST00000474048 ISPDA4D126 451 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 TMEM235A6NFC5 223 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 SIRPB1O00241 398 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 HSPB6O14558 160 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 SOCS1O15524 211 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 PTBP3O95758 552 aaKnown RBP8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 CLDN1O95832 211 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 CYB5R3P00387 301 aaPredicted RBP8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 SOD3P08294 240 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 INHBBP09529 407 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 MUC1P15941 1255 aaPredicted RBP8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 DUSP1P28562 367 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 SSTR2P30874 369 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 CD80P33681 288 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 RCVRNP35243 200 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 CFHR2P36980 270 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 MDH2P40926 338 aaKnown RBP8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 SSBP1Q04837 148 aaKnown RBP8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 ZNF79Q15937 498 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 CRIP3Q6Q6R5 217 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 ZCCHC24Q8N2G6 241 aaKnown RBP8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 FAM89BQ8N5H3 189 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 SETD6Q8TBK2 473 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 ZFAND2BQ8WV99 257 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 RDH5Q92781 318 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 CMSS1Q9BQ75 279 aaKnown RBP8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 PECRQ9BY49 303 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 ZMAT3Q9HA38 289 aaKnown RBP8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 MYOZ1Q9NP98 299 aaPredicted RBP8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 TMEM106BQ9NUM4 274 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 TREM2Q9NZC2 230 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 PLCE1Q9P212 2302 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 HSF4Q9ULV5 492 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 WIPI2Q9Y4P8 454 aa8.67□□□□□ -1.02
PRPF38A-202ENST00000474048 CFAP46Q8IYW2 2715 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 PPIAL4EA0A075B759 164 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 LINC00854A0A1B0GVQ3 168 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 UBE2QL1A1L167 161 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 FUOMA2VDF0 154 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 OOEPA6NGQ2 149 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 OR2AT4A6NND4 320 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 PPIAL4DF5H284 164 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 C3orf80F5H4A9 247 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 H7C417 338 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 RAB27BO00194 218 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 WNT9BO14905 357 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 GSTZ1O43708 216 aaPredicted RBP8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 GLAP06280 429 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 PPIAL4FP0DN26 164 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 IL7P13232 177 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 PTH2RP49190 550 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 ERVK11-1P61568 191 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 SRSF1Q07955 248 aaKnown RBP eCLIP8.66□□□□□ -1.021e-6■■■□□ 17.4
PRPF38A-202ENST00000474048 ZNF146Q15072 292 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 MST1LQ2TV78 715 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 MOGAT2Q3SYC2 334 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 C6orf201Q7Z4U5 140 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 Q8NFD4 153 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 RAB1CQ92928 201 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 ABHD1Q96SE0 405 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 DPCDQ9BVM2 203 aaPredicted RBP8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 RIMS4Q9H426 269 aaPredicted RBP8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 C12orf4Q9NQ89 552 aa8.66□□□□□ -1.02
PRPF38A-202ENST00000474048 ETAA1Q9NY74 926 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms