RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 EDDM3BP56851 147 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 GUCA2AQ02747 115 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 IZUMO2Q6UXV1 221 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 C1orf122Q6ZSJ8 110 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.7□□□□□ -0.54
VAMP4-203ENST00000474047 FAM216AQ8WUB2 273 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 RGP1Q92546 391 aaPredicted RBP11.7□□□□□ -0.54
VAMP4-203ENST00000474047 METTL8Q9H825 291 aaKnown RBP11.7□□□□□ -0.54
VAMP4-203ENST00000474047 CKLFQ9UBR5 152 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 TPRKBQ9Y3C4 175 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 FAM96BQ9Y3D0 163 aa11.7□□□□□ -0.54
VAMP4-203ENST00000474047 SVEP1Q4LDE5 3571 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 K7N7A8 449 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 LALBAP00709 142 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 CDK1P06493 297 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 UBA52P62987 128 aaKnown RBP11.69□□□□□ -0.54
VAMP4-203ENST00000474047 SCN1BQ07699 218 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 DEFB112Q30KQ8 113 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 YIF1BQ5BJH7 314 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 SPIN3Q5JUX0 258 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 NCR3LG1Q68D85 454 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 DMKNQ6E0U4 476 aaPredicted RBP11.69□□□□□ -0.54
VAMP4-203ENST00000474047 SAXO1Q8IYX7 474 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 ZDHHC22Q8N966 263 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 PPP1R35Q8TAP8 253 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 GCDHQ92947 438 aaPredicted RBP11.69□□□□□ -0.54
VAMP4-203ENST00000474047 SLC25A28Q96A46 364 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 SNX22Q96L94 193 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 ZNF48Q96MX3 618 aaPredicted RBP11.69□□□□□ -0.54
VAMP4-203ENST00000474047 MND1Q9BWT6 205 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 FAM192AQ9GZU8 254 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 ZMAT3Q9HA38 289 aaKnown RBP11.69□□□□□ -0.54
VAMP4-203ENST00000474047 ESM1Q9NQ30 184 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 C19orf12Q9NSK7 152 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 GSTK1Q9Y2Q3 226 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 A0A1W2PRD5 423 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 A0A1W2PRF3 423 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 A0A1W2PRM7 423 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 DNAJC9-AS1A6NH13 148 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 CELP19835 753 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 MYF6P23409 242 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 EDDM3AQ14507 147 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 NANOGP1Q8N7R0 232 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 RPS4Y2Q8TD47 263 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 RHOFQ9HBH0 211 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 HMG20AQ9NP66 347 aa11.69□□□□□ -0.54
VAMP4-203ENST00000474047 EXOSC4Q9NPD3 245 aaKnown RBP11.69□□□□□ -0.54
VAMP4-203ENST00000474047 MDFIC2A0A1B0GVS7 189 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 KDM4BO94953 1096 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 ATP6V1G2O95670 118 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 PRTN3P24158 256 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 PRB3Q04118 309 aaPredicted RBP11.68□□□□□ -0.54
VAMP4-203ENST00000474047 RSU1Q15404 277 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 GRK1Q15835 563 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 Q499Y3 187 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 TMEM200BQ69YZ2 307 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 RNF144BQ7Z419 303 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 OR8H2Q8N162 312 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 Q8N7P7 452 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 OR51A2Q8NGJ7 313 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 OR13C5Q8NGS8 318 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 TNFAIP8L1Q8WVP5 186 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 S100A13Q99584 98 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 NOX4Q9NPH5 578 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 TMEM138Q9NPI0 162 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 TNFRSF19Q9NS68 423 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 FKBP14Q9NWM8 211 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 IL36RNQ9UBH0 155 aa11.68□□□□□ -0.54
VAMP4-203ENST00000474047 IGKV1-12A0A0C4DH73 117 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 SIRPB1O00241 398 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 IGKV1D-12P01611 117 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 ZNF44P15621 663 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 BDKRB2P30411 391 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 BMXP51813 675 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 RIPK1Q13546 671 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 DDI2Q5TDH0 399 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 METAP1DQ6UB28 335 aaPredicted RBP11.67□□□□□ -0.54
VAMP4-203ENST00000474047 C12orf54Q6X4T0 127 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 ZNF485Q8NCK3 441 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 OR52N4Q8NGI2 321 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 CNBD2Q96M20 576 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 NR1H4Q96RI1 486 aaPredicted RBP11.67□□□□□ -0.54
VAMP4-203ENST00000474047 ANKRD60Q9BZ19 345 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 CCDC90BQ9GZT6 254 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 CHST6Q9GZX3 395 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 HEXA-AS1Q9H8Q6 139 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 SEBOXQ9HB31 216 aaPredicted RBP11.67□□□□□ -0.54
VAMP4-203ENST00000474047 ING4Q9UNL4 249 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 SF3B6Q9Y3B4 125 aaKnown RBP11.67□□□□□ -0.54
VAMP4-203ENST00000474047 CUBNO60494 3623 aa11.67□□□□□ -0.54
VAMP4-203ENST00000474047 HOXA3O43365 443 aaPredicted RBP11.66□□□□□ -0.54
VAMP4-203ENST00000474047 ZNF737O75373 536 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 PAHP00439 452 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 ALDOBP05062 364 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 ZNF93P35789 620 aaPredicted RBP11.66□□□□□ -0.54
VAMP4-203ENST00000474047 DLX1P56177 255 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 KLRD1Q13241 179 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 ZNF146Q15072 292 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 MED22Q15528 200 aa11.66□□□□□ -0.54
VAMP4-203ENST00000474047 OR14A2Q96R54 314 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms