RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 C19orf12Q9NSK7 152 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 PLCXD1Q9NUJ7 323 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 CNOT2Q9NZN8 540 aaKnown RBP10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 SOX21Q9Y651 276 aaPredicted RBP10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 POMT1Q9Y6A1 747 aa10.62□□□□□ -0.71
SHROOM3-204ENST00000473602 hCG_1809904A0A1W2PP81 198 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 A0A1W2PPE2 198 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 A0A1W2PR64 198 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 A0A1W2PRV1 198 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 F8VVB4 439 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 F8VWA3 439 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 RNASEK-C17orf49H0YIS7 233 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 H0YJX3 145 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 HOXA3O43365 443 aaPredicted RBP10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 ZNF737O75373 536 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 CD2P06729 351 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 UBE2E1P51965 193 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 COL10A1Q03692 680 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 SLC34A1Q06495 639 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 SRSF4Q08170 494 aaKnown RBP10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 ACSM1Q08AH1 577 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 ZNF146Q15072 292 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 OR2G6Q5TZ20 316 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 C16orf87Q6PH81 154 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 LDLRAD3Q86YD5 345 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 OR8H2Q8N162 312 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 ASCC1Q8N9N2 400 aaKnown RBP10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 ZSCAN4Q8NAM6 433 aaPredicted RBP10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 SSMEM1Q8WWF3 244 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 SMIM19Q96E16 107 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 BABAM2Q9NXR7 383 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 GLS2Q9UI32 602 aa10.61□□□□□ -0.71
SHROOM3-204ENST00000473602 A0A0U1RQK1 487 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 OGG1O15527 345 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 KDM4BO94953 1096 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 HAND1O96004 215 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 MELTFP08582 738 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 HCKP08631 526 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 FBP1P09467 338 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 GNAO1P09471 354 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 RAB3AP20336 220 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 BCL3P20749 454 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 GTF2A1P52655 376 aaPredicted RBP10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 TAS2R43P59537 309 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 RPL15P61313 204 aaKnown RBP10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 ST3GAL4Q11206 333 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 TMEM200BQ69YZ2 307 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 XAF1Q6GPH4 301 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 ZNF529Q6P280 563 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 GDPD3Q7L5L3 318 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 PPP1R35Q8TAP8 253 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 TFAP2CQ92754 450 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 GGHQ92820 318 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 SNX22Q96L94 193 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 HMG20AQ9NP66 347 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 RBFOX1Q9NWB1 397 aaKnown RBP10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 SF3B6Q9Y3B4 125 aaKnown RBP10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 FAM96BQ9Y3D0 163 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 PCDHGB5Q9Y5G0 923 aa10.6□□□□□ -0.71
SHROOM3-204ENST00000473602 NPFFO15130 113 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 MAGEB3O15480 346 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 RBP4P02753 201 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 PRKACAP17612 351 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 NPBWR2P48146 333 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 BMXP51813 675 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 KISS1Q15726 138 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 PDZD9Q8IXQ8 264 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 ZNF485Q8NCK3 441 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 RGP1Q92546 391 aaPredicted RBP10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 TMEM106AQ96A25 262 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 SPACA5Q96QH8 159 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 KRTAP3-3Q9BYR6 98 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 KRTAP3-2Q9BYR7 98 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 DPAGT1Q9H3H5 408 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 HEXA-AS1Q9H8Q6 139 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 NKX1-2Q9UD57 310 aaPredicted RBP10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 PSORS1C1Q9UIG5 152 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 ZNF281Q9Y2X9 895 aa10.59□□□□□ -0.71
SHROOM3-204ENST00000473602 IGKV1-12A0A0C4DH73 117 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 SH2D1BO14796 132 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 ANGPTL7O43827 346 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 INMTO95050 263 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 IGKV1D-12P01611 117 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 SAA4P35542 130 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 IER3P46695 156 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 SOX2P48431 317 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 EDDM3BP56851 147 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 ERVFRD-1P60508 538 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 ZP1P60852 638 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 MEF2CQ06413 473 aaPredicted RBP10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 KLRD1Q13241 179 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 YIF1BQ5BJH7 314 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 HIST2H2BDQ6DRA6 164 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 DMKNQ6E0U4 476 aaPredicted RBP10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 LAIR2Q6ISS4 152 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 CRIP3Q6Q6R5 217 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 C17orf107Q6ZR85 190 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 AHSA2Q719I0 299 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 STX19Q8N4C7 294 aa10.58□□□□□ -0.72
SHROOM3-204ENST00000473602 C11orf42Q8N5U0 333 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms