RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 HLA-DMAP28067 261 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 PPOXP50336 477 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 RASSF2P50749 326 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 ACTBP60709 375 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 UBE2MP61081 183 aaKnown RBP5.49□□□□□ -1.53
SCAF4-205ENST00000472318 UBE2KP61086 200 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 RPL27P61353 136 aaKnown RBP5.49□□□□□ -1.53
SCAF4-205ENST00000472318 ATP6V0D1P61421 351 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 ACTA2P62736 377 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 ACTG2P63267 376 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 ACTC1P68032 377 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 ACTA1P68133 377 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 GTF2H2Q13888 395 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 SAXO2Q658L1 398 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 GTF2H2CQ6P1K8 395 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 ATRAIDQ6UW56 229 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 FCRLAQ7L513 359 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 SSX8Q7RTT4 187 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 P2RY8Q86VZ1 359 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 ZNF433Q8N7K0 673 aaPredicted RBP5.49□□□□□ -1.53
SCAF4-205ENST00000472318 SLC37A3Q8NCC5 494 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 C19orf18Q8NEA5 215 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 NOXO1Q8NFA2 376 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 OR4M2Q8NGB6 313 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 OR2V1Q8NHB1 315 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 NSL1Q96IY1 281 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 FKRPQ9H9S5 495 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 PLAC1Q9HBJ0 212 aa5.49□□□□□ -1.53
SCAF4-205ENST00000472318 FBXO6Q9NRD1 293 aaPredicted RBP5.49□□□□□ -1.53
SCAF4-205ENST00000472318 C5orf63A6NC05 138 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 NKX6-3A6NJ46 265 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 J3QLI3 93 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 TNFRSF13BO14836 293 aaPredicted RBP5.48□□□□□ -1.53
SCAF4-205ENST00000472318 ACOX3O15254 700 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 KHDRBS3O75525 346 aaKnown RBP5.48□□□□□ -1.53
SCAF4-205ENST00000472318 REM1O75628 298 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 GAGE7O76087 117 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 MPZL1O95297 269 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 TNFAIP8O95379 198 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 NGFP01138 241 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 IGHG4P01861 327 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 KLK1P06870 262 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 CD3GP09693 182 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 OR4A8P0C604 315 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 OCM2P0CE71 109 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 GAGE12FP0CL80 117 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 GAGE12GP0CL81 117 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 GAGE12IP0CL82 117 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 OGNP20774 298 aaKnown RBP5.48□□□□□ -1.53
SCAF4-205ENST00000472318 COL8A2P25067 703 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 MAP3K8P41279 467 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 GPR6P46095 362 aaPredicted RBP5.48□□□□□ -1.53
SCAF4-205ENST00000472318 OR3A2P47893 321 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 SERPINB9P50453 376 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 XKP51811 444 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 BTG1P62324 171 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 GAGE1Q13065 139 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 GAGE4Q13068 117 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 ZNF239Q16600 458 aaKnown RBP5.48□□□□□ -1.53
SCAF4-205ENST00000472318 GTDC1Q4AE62 458 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 KLF17Q5JT82 389 aaPredicted RBP5.48□□□□□ -1.53
SCAF4-205ENST00000472318 Q6ZSR3 168 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 Q6ZSV7 163 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 SSX6Q7RTT6 188 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 CMTM1Q8IZ96 169 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 TPRX1Q8N7U7 411 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 WDR31Q8NA23 367 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 OR10V1Q8NGI7 309 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 ZNF426Q9BUY5 554 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 MS4A8Q9BY19 250 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 SRXN1Q9BYN0 137 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 TOLLIPQ9H0E2 274 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.48□□□□□ -1.536e-8■□□□□ 9.9
SCAF4-205ENST00000472318 OR2W1Q9Y3N9 320 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 AUP1Q9Y679 476 aa5.48□□□□□ -1.53
SCAF4-205ENST00000472318 STAB2Q8WWQ8 2551 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 A0A087WZ39 114 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 IGHV4-28A0A0C4DH34 117 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 PFDN6O15212 129 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 TM9SF1O15321 606 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 EIF4E2O60573 245 aaKnown RBP5.47□□□□□ -1.53
SCAF4-205ENST00000472318 FGGP02679 453 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 CA6P23280 308 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 SHC1P29353 583 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 RBM34P42696 430 aaKnown RBP5.47□□□□□ -1.53
SCAF4-205ENST00000472318 SSR2P43308 183 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 AP1S2P56377 157 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 ERVK11-1P61568 191 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 SCRN3Q0VDG4 424 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 RAB40BQ12829 278 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 SGCAQ16586 387 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 C5orf64Q2M2E5 130 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 RFTN2Q52LD8 501 aaPredicted RBP5.47□□□□□ -1.53
SCAF4-205ENST00000472318 CASC10Q5T4H9 136 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 SEL1L2Q5TEA6 688 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 HBMQ6B0K9 141 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.47□□□□□ -1.53
SCAF4-205ENST00000472318 TSEN54Q7Z6J9 526 aaKnown RBP5.47□□□□□ -1.53
SCAF4-205ENST00000472318 C15orf54Q8N8G6 183 aa5.47□□□□□ -1.53
SCAF4-205ENST00000472318 OR52H1Q8NGJ2 320 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms