RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 GABRR1P24046 479 aa14.92□□□□□ -0.02
HSPG2-208ENST00000471322 HAAOP46952 286 aa14.92□□□□□ -0.02
HSPG2-208ENST00000471322 KRTAP10-9P60411 292 aa14.92□□□□□ -0.02
HSPG2-208ENST00000471322 CALHM1Q8IU99 346 aa14.92□□□□□ -0.02
HSPG2-208ENST00000471322 BHLHE23Q8NDY6 225 aa14.92□□□□□ -0.02
HSPG2-208ENST00000471322 GIMAP1Q8WWP7 306 aa14.92□□□□□ -0.02
HSPG2-208ENST00000471322 GINS4Q9BRT9 223 aa14.92□□□□□ -0.02
HSPG2-208ENST00000471322 RTL8AQ9BWD3 113 aa14.92□□□□□ -0.02
HSPG2-208ENST00000471322 MED28Q9H204 178 aa14.92□□□□□ -0.02
HSPG2-208ENST00000471322 SLC2A8Q9NY64 477 aa14.92□□□□□ -0.02
HSPG2-208ENST00000471322 IQCF6A8MYZ5 107 aa14.91□□□□□ -0.02
HSPG2-208ENST00000471322 ARPC1BO15143 372 aaKnown RBP14.91□□□□□ -0.02
HSPG2-208ENST00000471322 PMELP40967 661 aa14.91□□□□□ -0.02
HSPG2-208ENST00000471322 FBXL14Q8N1E6 418 aa14.91□□□□□ -0.02
HSPG2-208ENST00000471322 BPIFB2Q8N4F0 458 aa14.91□□□□□ -0.02
HSPG2-208ENST00000471322 FAM222BQ8WU58 562 aa14.91□□□□□ -0.02
HSPG2-208ENST00000471322 MARS2Q96GW9 593 aaKnown RBP14.91□□□□□ -0.02
HSPG2-208ENST00000471322 ST6GAL2Q96JF0 529 aa14.91□□□□□ -0.02
HSPG2-208ENST00000471322 PKIBQ9C010 78 aa14.91□□□□□ -0.02
HSPG2-208ENST00000471322 RHOFQ9HBH0 211 aa14.91□□□□□ -0.02
HSPG2-208ENST00000471322 GPN1Q9HCN4 374 aaPredicted RBP14.91□□□□□ -0.02
HSPG2-208ENST00000471322 ING3Q9NXR8 418 aa14.91□□□□□ -0.02
HSPG2-208ENST00000471322 ST3GAL6Q9Y274 331 aa14.91□□□□□ -0.02
HSPG2-208ENST00000471322 IGHV1-18A0A0C4DH31 117 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 TRAPPC2LH3BP13 241 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 FCER2P06734 321 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 THBDP07204 575 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 CA6P23280 308 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 TAF9Q16594 264 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 NHLRC3Q5JS37 347 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 CD276Q5ZPR3 534 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 SSX8Q7RTT4 187 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 HOGA1Q86XE5 327 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 WFDC8Q8IUA0 241 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 GVQW1Q8N7I0 195 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 OR4S1Q8NGB4 309 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 OR4K15Q8NH41 348 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 KLF14Q8TD94 323 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-208ENST00000471322 TINAGL1Q9GZM7 467 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-208ENST00000471322 FGF23Q9GZV9 251 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-208ENST00000471322 PLK3Q9H4B4 646 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 FLVCR2Q9UPI3 526 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 SPEF1Q9Y4P9 236 aa14.9□□□□□ -0.02
HSPG2-208ENST00000471322 MAP1AP78559 2803 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-208ENST00000471322 IGHV2OR16-5A0A0B4J2B6 119 aa14.89□□□□□ -0.03
HSPG2-208ENST00000471322 A6NNC1 897 aa14.89□□□□□ -0.03
HSPG2-208ENST00000471322 M0QYG6 137 aa14.89□□□□□ -0.03
HSPG2-208ENST00000471322 IFNA6P05013 189 aa14.89□□□□□ -0.03
HSPG2-208ENST00000471322 SFTPBP07988 381 aa14.89□□□□□ -0.03
HSPG2-208ENST00000471322 ZNF735P0CB33 412 aa14.89□□□□□ -0.03
HSPG2-208ENST00000471322 RBM11P57052 281 aaKnown RBP14.89□□□□□ -0.03
HSPG2-208ENST00000471322 MRPS15P82914 257 aaKnown RBP14.89□□□□□ -0.03
HSPG2-208ENST00000471322 PSG7Q13046 419 aa14.89□□□□□ -0.03
HSPG2-208ENST00000471322 ZNF718Q3SXZ3 478 aa14.89□□□□□ -0.03
HSPG2-208ENST00000471322 ATAD3CQ5T2N8 411 aa14.89□□□□□ -0.03
HSPG2-208ENST00000471322 IDO2Q6ZQW0 420 aa14.89□□□□□ -0.03
HSPG2-208ENST00000471322 DACT3Q96B18 629 aaPredicted RBP14.89□□□□□ -0.03
HSPG2-208ENST00000471322 ALX4Q9H161 411 aaPredicted RBP14.89□□□□□ -0.03
HSPG2-208ENST00000471322 EDARQ9UNE0 448 aa14.89□□□□□ -0.03
HSPG2-208ENST00000471322 SNRPGP15A8MWD9 76 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 SIAH2O43255 324 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 CHATP28329 748 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 SSTR2P30874 369 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 TAS2R46P59540 309 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 FGF12P61328 243 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 IL24Q13007 206 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 NKAPLQ5M9Q1 402 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 VAX1Q5SQQ9 334 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 GLDNQ6ZMI3 551 aaPredicted RBP14.88□□□□□ -0.03
HSPG2-208ENST00000471322 C6orf201Q7Z4U5 140 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 FBXW5Q969U6 566 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 C14orf79Q96F83 325 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 CHST6Q9GZX3 395 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 OR51I2Q9H344 312 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 ROS1P08922 2347 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 PDZD2O15018 2839 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.88□□□□□ -0.03
HSPG2-208ENST00000471322 GEMIN2O14893 280 aaKnown RBP14.88□□□□□ -0.03
HSPG2-208ENST00000471322 LILRA1O75019 489 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 PDCD6O75340 191 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 FUT3P21217 361 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 KITLGP21583 273 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 GCH1P30793 250 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 HRH1P35367 487 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 NAAAQ02083 359 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 CBX3Q13185 183 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 FAM76BQ5HYJ3 339 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 MBNL2Q5VZF2 373 aaKnown RBP14.88□□□□□ -0.03
HSPG2-208ENST00000471322 SIGIRRQ6IA17 410 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 OR52W1Q6IF63 320 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 LINC00596Q86U02 117 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 TCTE3Q8IZS6 198 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 CCDC107Q8WV48 283 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 NRGNQ92686 78 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 EMG1Q92979 244 aaKnown RBP14.88□□□□□ -0.03
HSPG2-208ENST00000471322 SLC6A7Q99884 636 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 TMEM100Q9NV29 134 aa14.88□□□□□ -0.03
HSPG2-208ENST00000471322 PURGQ9UJV8 347 aaKnown RBP14.88□□□□□ -0.03
HSPG2-208ENST00000471322 LRP5LA4QPB2 252 aa14.87□□□□□ -0.03
HSPG2-208ENST00000471322 TMEM210A6NLX4 147 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms