RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 TMEM269A0A1B0GVZ9 245 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 SERPINA3P01011 423 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 SLC2A2P11168 524 aaPredicted RBP11.16□□□□□ -0.62
HMGN1-211ENST00000471260 MYL9P24844 172 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 ATP6V1E1P36543 226 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 RAB25P57735 213 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 ACTA2P62736 377 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 ACTG2P63267 376 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 MXD1Q05195 221 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 RIPPLY1Q0D2K3 151 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 PYDC2Q56P42 97 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 WDR38Q5JTN6 314 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 ATAD3CQ5T2N8 411 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 ZBTB37Q5TC79 503 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 CNIH2Q6PI25 160 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 SHISA2Q6UWI4 295 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 BRD3OSQ6XYD6 125 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 Q6YL49 198 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 ZDHHC23Q8IYP9 409 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 LY6G5BQ8NDX9 201 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 HAVCR2Q8TDQ0 301 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 ZDHHC16Q969W1 377 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 DUX5Q96PT3 197 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 OR8B4Q96RC9 309 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 TBX15Q96SF7 602 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 ALG8Q9BVK2 526 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 SIRPDQ9H106 197 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 RBFOX1Q9NWB1 397 aaKnown RBP11.16□□□□□ -0.62
HMGN1-211ENST00000471260 FAM206AQ9NX38 181 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 BABAM2Q9NXR7 383 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 DNAJB11Q9UBS4 358 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 RPUSD1Q9UJJ7 312 aaKnown RBP11.16□□□□□ -0.62
HMGN1-211ENST00000471260 KLHDC2Q9Y2U9 406 aa11.16□□□□□ -0.62
HMGN1-211ENST00000471260 IGHV3OR15-7A0A075B7D8 119 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 CENPVL3A0A0U1RRI6 287 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 A0A1B0GVI7 797 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-211ENST00000471260 NDUFB3O43676 98 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 MTRF1O75570 445 aaKnown RBP11.15□□□□□ -0.62
HMGN1-211ENST00000471260 IGLV3-1P01715 115 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 SFTPBP07988 381 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 CELP19835 753 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 AZGP1P25311 298 aaKnown RBP11.15□□□□□ -0.62
HMGN1-211ENST00000471260 TALDO1P37837 337 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 TGM4P49221 684 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 RIDAP52758 137 aaKnown RBP11.15□□□□□ -0.62
HMGN1-211ENST00000471260 HCCSP53701 268 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 GNG3P63215 75 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 DEFB112Q30KQ8 113 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 CEACAM21Q3KPI0 293 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 CDONQ4KMG0 1287 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 HSD17B12Q53GQ0 312 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 LRRC10Q5BKY1 277 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 STUMQ69YW2 141 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 PLET1Q6UQ28 207 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 TCTE3Q8IZS6 198 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 SYS1Q8N2H4 156 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 MS4A15Q8N5U1 240 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 SCCPDHQ8NBX0 429 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 OR5A2Q8NGI9 324 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 HPSE2Q8WWQ2 592 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 ST8SIA4Q92187 359 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 PHYHIPQ92561 330 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 MED30Q96HR3 178 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 CNN2Q99439 309 aaKnown RBP11.15□□□□□ -0.62
HMGN1-211ENST00000471260 CCL13Q99616 98 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 PBOV1Q9GZY1 135 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 C11orf54Q9H0W9 315 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-211ENST00000471260 MOB1AQ9H8S9 216 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 ACOXLQ9NUZ1 547 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 NUFIP1Q9UHK0 495 aaKnown RBP11.15□□□□□ -0.62
HMGN1-211ENST00000471260 POMT1Q9Y6A1 747 aa11.15□□□□□ -0.62
HMGN1-211ENST00000471260 A0A1B0GUS0 222 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 DAPL1A0PJW8 107 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 OR5B21A6NL26 309 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 CENPXA8MT69 81 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 FAM25AB3EWG3 89 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 FAM25CB3EWG5 89 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 FAM25GB3EWG6 89 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 HOXA3O43365 443 aaPredicted RBP11.14□□□□□ -0.63
HMGN1-211ENST00000471260 FCN3O75636 299 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 LALBAP00709 142 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 CLEC2LP0C7M8 214 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 GSTT2P0CG29 244 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 GSTT2BP0CG30 244 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 RPL15P61313 204 aaKnown RBP11.14□□□□□ -0.63
HMGN1-211ENST00000471260 ARF6P62330 175 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 EGR3Q06889 387 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 LHFPL3Q86UP9 236 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 CMTM4Q8IZR5 234 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 Q8N402 240 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 C8orf46Q8TAG6 207 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 ZNF671Q8TAW3 534 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 NPRL2Q8WTW4 380 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 TMEM203Q969S6 136 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 ST6GAL2Q96JF0 529 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 CMTM3Q96MX0 182 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 MMP24Q9Y5R2 645 aa11.14□□□□□ -0.63
HMGN1-211ENST00000471260 IGHV1-69DA0A0B4J2H0 117 aa11.13□□□□□ -0.63
HMGN1-211ENST00000471260 NKX6-3A6NJ46 265 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms