RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 HOXC4P09017 264 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-210ENST00000471181 HOXC13P31276 330 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 ASAH1Q13510 395 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 FZD2Q14332 565 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 GAB4Q2WGN9 574 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 TMEM215Q68D42 235 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 NTNG2Q96CW9 530 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 SNX22Q96L94 193 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 ALKBH3Q96Q83 286 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-210ENST00000471181 PRRX2Q99811 253 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 HSF4Q9ULV5 492 aa6.17□□□□□ -1.42
BRCA1-210ENST00000471181 TFAP2AP05549 437 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 EMDP50402 254 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 ARF6P62330 175 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 HLA-DRB3P79483 266 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 EMC4Q5J8M3 183 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 ZC3H3Q8IXZ2 948 aaKnown RBP6.16□□□□□ -1.42
BRCA1-210ENST00000471181 OR2T10Q8NGZ9 312 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 OR2V1Q8NHB1 315 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 APOBEC3DQ96AK3 386 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-210ENST00000471181 LAT2Q9GZY6 243 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 MBNL1Q9NR56 388 aaKnown RBP6.16□□□□□ -1.42
BRCA1-210ENST00000471181 TMEM167BQ9NRX6 74 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 PLA2G3Q9NZ20 509 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 ELOA3CA0A087WX78 387 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-210ENST00000471181 C7orf72A4D263 438 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 C11orf94C9JXX5 98 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 GPR3P46089 330 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 DYNLT3P51808 116 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 BSXQ3C1V8 233 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 THSD4Q6ZMP0 1018 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 DND1Q8IYX4 353 aaKnown RBP6.16□□□□□ -1.42
BRCA1-210ENST00000471181 NOXO1Q8NFA2 376 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 UBE2FQ969M7 185 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 ANAPC16Q96DE5 110 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 SLC35B3Q9H1N7 401 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 TRAV21A0A0B4J279 112 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 OR2W5A6NFC9 320 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 DIRC3C9JPN6 131 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 FZD9O00144 591 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 ISLRO14498 428 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 SS18L1O75177 396 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-210ENST00000471181 DEFB103AP81534 67 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 CTU2Q2VPK5 515 aaKnown RBP6.16□□□□□ -1.42
BRCA1-210ENST00000471181 SYT14P1Q58G82 188 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 Q5PR19 223 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 ZNF880Q6PDB4 577 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 SCD5Q86SK9 330 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 VRK3Q8IV63 474 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 OR4X1Q8NH49 305 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 ZNF418Q8TF45 676 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-210ENST00000471181 SSMEM1Q8WWF3 244 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 SIGLEC11Q96RL6 698 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 SPNS1Q9H2V7 528 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 MANBALQ9NQG1 85 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 TNS1Q9HBL0 1735 aaKnown RBP6.16□□□□□ -1.42
BRCA1-210ENST00000471181 LAMB4A4D0S4 1761 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 IDSB3KWA1 339 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 HPXP02790 462 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 FAM157CP0CG43 387 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 SPINK2P20155 84 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 PNLIPRP3Q17RR3 467 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 CEACAM16Q2WEN9 425 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 RFLNAQ6ZTI6 216 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 CYS1Q717R9 158 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 C16orf82Q7Z2V1 217 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 CADM3Q8N126 398 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 TMEM229BQ8NBD8 167 aa6.16□□□□□ -1.42
BRCA1-210ENST00000471181 PTPMT1Q8WUK0 201 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-210ENST00000471181 PARD6GQ9BYG4 376 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-210ENST00000471181 DNAJB12Q9NXW2 375 aaKnown RBP6.16□□□□□ -1.42
BRCA1-210ENST00000471181 hADV38S2A0JD32 116 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 HAX1O00165 279 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 FCGR2BP31994 310 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-210ENST00000471181 NPBWR2P48146 333 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 CLDN20P56880 219 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 GGTA1PQ4G0N0 100 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 MRM1Q6IN84 353 aaKnown RBP6.15□□□□□ -1.42
BRCA1-210ENST00000471181 OR2W3Q7Z3T1 314 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 PRR7Q8TB68 274 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 TM4SF19Q96DZ7 209 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 SOSTQ9BQB4 213 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 FRG2CA6NGY1 282 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 SNRPGP15A8MWD9 76 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 B4DEV8 164 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 FPR2P25090 351 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 NXPH1P58417 271 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 SLCO4C1Q6ZQN7 724 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 TMEM136Q6ZRR5 245 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 ARIH2OSQ8N7S6 290 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 OR8G5Q8NG78 346 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 PDXPQ96GD0 296 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 RAB40CQ96S21 281 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 C16orf70Q9BSU1 422 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 PSMG3Q9BT73 122 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-210ENST00000471181 TMEM38BQ9NVV0 291 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 RASL12Q9NYN1 266 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 C5P01031 1676 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 LY75O60449 1722 aa6.15□□□□□ -1.42
BRCA1-210ENST00000471181 PSMB11A5LHX3 300 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms