RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 SMAD5-AS1Q9Y6J3 95 aa7.19□□□□□ -1.26
CCDC171-204ENST00000470191 U3KQV3 271 aa7.19□□□□□ -1.26
CCDC171-204ENST00000470191 LINC01548A6NM66 108 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 PRR23D1E9PI22 279 aaPredicted RBP7.18□□□□□ -1.26
CCDC171-204ENST00000470191 H3BN98 237 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 M0QZK8 103 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 IGHV3-7P01780 117 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 MRPL3P09001 348 aaKnown RBP7.18□□□□□ -1.26
CCDC171-204ENST00000470191 PRR23D2P0DMB1 279 aaPredicted RBP7.18□□□□□ -1.26
CCDC171-204ENST00000470191 CEACAM3P40198 252 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 GP2P55259 537 aaKnown RBP7.18□□□□□ -1.26
CCDC171-204ENST00000470191 ERVK11-1P61568 191 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 SLC35B1P78383 322 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 MFGE8Q08431 387 aaPredicted RBP7.18□□□□□ -1.26
CCDC171-204ENST00000470191 UTF1Q5T230 341 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 SLC35E3Q7Z769 313 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 EGFL6Q8IUX8 553 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 BBS1Q8NFJ9 593 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 TEX47Q8TBZ9 253 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 ZNF596Q8TC21 504 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 EMG1Q92979 244 aaKnown RBP7.18□□□□□ -1.26
CCDC171-204ENST00000470191 CEP19Q96LK0 163 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 NSMCE2Q96MF7 247 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 CADM1Q9BY67 442 aaKnown RBP7.18□□□□□ -1.26
CCDC171-204ENST00000470191 DCLRE1BQ9H816 532 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 ZMAT4Q9H898 229 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 GORASP2Q9H8Y8 452 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 IL1RAPQ9NPH3 570 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 MTCH1Q9NZJ7 389 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 SACSQ9NZJ4 4579 aa7.18□□□□□ -1.26
CCDC171-204ENST00000470191 STAB2Q8WWQ8 2551 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 LYSTQ99698 3801 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 DNAH7Q8WXX0 4024 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 BUB1B-PAK6H3BSN5 160 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 SIRPB1O00241 398 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 ARPC2O15144 300 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 PSPNO60542 156 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 DHRS3O75911 302 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 SASH3O75995 380 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 HAND1O96004 215 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 FAM106CPP0CH98 169 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 ATP6V1B1P15313 513 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 TMEM11P17152 192 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 NFYBP25208 207 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 MNDAP41218 407 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 BDH1Q02338 343 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 KPNB1Q14974 876 aaKnown RBP7.17□□□□□ -1.26
CCDC171-204ENST00000470191 ODF4Q2M2E3 257 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 SLX4IPQ5VYV7 408 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 OR52W1Q6IF63 320 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 HACD2Q6Y1H2 254 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 OR56B4Q8NH76 319 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 TOMM40LQ969M1 308 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 SPAG4Q9NPE6 437 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 MAGEL2Q9UJ55 1249 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 IKZF2Q9UKS7 526 aa7.17□□□□□ -1.26
CCDC171-204ENST00000470191 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.17□□□□□ -1.26
CCDC171-204ENST00000470191 TRGV10A0A0A0MS01 117 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 PRR32B1ATL7 298 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 DLGAP1O14490 977 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 MAGEB4O15481 346 aaPredicted RBP7.16□□□□□ -1.26
CCDC171-204ENST00000470191 KRT36O76013 467 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 IGLV1-47P01700 117 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 TTRP02766 147 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 FRMD6-AS1P0C7T7 363 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 PRKACAP17612 351 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 ALOX5APP20292 161 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 MPZP25189 248 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 SLC6A1P30531 599 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 GLIPR1P48060 266 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 PRRX1P54821 245 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 SCN1BQ07699 218 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 IL24Q13007 206 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 APOFQ13790 326 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 HLA-DRB5Q30154 266 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 CYP2R1Q6VVX0 501 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 PLEKHG7Q6ZR37 379 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 SLC25A26Q70HW3 274 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 KRT74Q7RTS7 529 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 RTN4RL2Q86UN3 420 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 CPOQ8IVL8 374 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 FOXRED2Q8IWF2 684 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 STPG2Q8N412 459 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 DRAM1Q8N682 238 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 C5orf56Q8N8D9 126 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 OR8U1Q8NH10 309 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 LEAP2Q969E1 77 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 NIPSNAP1Q9BPW8 284 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 MROQ9BYG7 248 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 PKIBQ9C010 78 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 GAL3ST2Q9H3Q3 398 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 SLC7A11Q9UPY5 501 aa7.16□□□□□ -1.26
CCDC171-204ENST00000470191 UBE2J1Q9Y385 318 aaPredicted RBP7.16□□□□□ -1.26
CCDC171-204ENST00000470191 HUWE1Q7Z6Z7 4374 aaKnown RBP7.15□□□□□ -1.26
CCDC171-204ENST00000470191 IGKV1-27A0A075B6S5 117 aa7.15□□□□□ -1.26
CCDC171-204ENST00000470191 ACOD1A6NK06 481 aa7.15□□□□□ -1.26
CCDC171-204ENST00000470191 LOC110117498-PIK3R3F6TDL0 507 aa7.15□□□□□ -1.26
CCDC171-204ENST00000470191 MGST3O14880 152 aa7.15□□□□□ -1.26
CCDC171-204ENST00000470191 CCDC22O60826 627 aa7.15□□□□□ -1.26
CCDC171-204ENST00000470191 IGLV3-1P01715 115 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms