RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 KLHL22Q53GT1 634 aa13.35□□□□□ -0.27
GTF3C2-209ENST00000470115 C17orf107Q6ZR85 190 aa13.35□□□□□ -0.27
GTF3C2-209ENST00000470115 ZNF676Q8N7Q3 588 aa13.35□□□□□ -0.27
GTF3C2-209ENST00000470115 BEND2Q8NDZ0 799 aa13.35□□□□□ -0.27
GTF3C2-209ENST00000470115 OR13C3Q8NGS6 347 aa13.35□□□□□ -0.27
GTF3C2-209ENST00000470115 LINC01006Q8NI28 216 aa13.35□□□□□ -0.27
GTF3C2-209ENST00000470115 WFDC12Q8WWY7 111 aa13.35□□□□□ -0.27
GTF3C2-209ENST00000470115 EMG1Q92979 244 aaKnown RBP13.35□□□□□ -0.27
GTF3C2-209ENST00000470115 CNBD2Q96M20 576 aa13.35□□□□□ -0.27
GTF3C2-209ENST00000470115 ZNF184Q99676 751 aaPredicted RBP13.35□□□□□ -0.27
GTF3C2-209ENST00000470115 ALG8Q9BVK2 526 aa13.35□□□□□ -0.27
GTF3C2-209ENST00000470115 RBFOX1Q9NWB1 397 aaKnown RBP13.35□□□□□ -0.27
GTF3C2-209ENST00000470115 IL36RNQ9UBH0 155 aa13.35□□□□□ -0.27
GTF3C2-209ENST00000470115 RNF114Q9Y508 228 aa13.35□□□□□ -0.27
GTF3C2-209ENST00000470115 hCG_1809904A0A1W2PP81 198 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 A0A1W2PPE2 198 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 A0A1W2PR64 198 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 A0A1W2PRV1 198 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 TMEM82A0PJX8 343 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 FADS2O95864 444 aaKnown RBP13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 CYB5AP00167 134 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 IGHA1P01876 353 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 CALCBP10092 127 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 BCL3P20749 454 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 COX7A1P24310 79 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 PAX6P26367 422 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 DUSP1P28562 367 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 DLX6P56179 175 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 EDDM3BP56851 147 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 ZNF782Q6ZMW2 699 aaPredicted RBP13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 Q6ZSV7 163 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 GDPD3Q7L5L3 318 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 RNF144BQ7Z419 303 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 Q8IYB0 196 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 FAM58AQ8N1B3 248 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 SYS1Q8N2H4 156 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 ZSCAN4Q8NAM6 433 aaPredicted RBP13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 BPIFB6Q8NFQ5 453 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 OR5R1Q8NH85 324 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 RFT1Q96AA3 541 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 SNX22Q96L94 193 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 ZNF649Q9BS31 505 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 Q9H521 79 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 ERVK13-1Q9NX77 482 aa13.34□□□□□ -0.27
GTF3C2-209ENST00000470115 C17orf98A8MV24 154 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 E9PI62 339 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 H3BUX3 64 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 HAND1O96004 215 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 OCM2P0CE71 109 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 OCMP0CE72 109 aaPredicted RBP13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 BMXP51813 675 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 KRTAP10-3P60369 221 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 RAB40BQ12829 278 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 PDZK1IP1Q13113 114 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 DHRS7BQ6IAN0 325 aaPredicted RBP13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 LHFPL2Q6ZUX7 228 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 OR8H2Q8N162 312 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 OR52N4Q8NGI2 321 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 OR52I1Q8NGK6 324 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 OR13C9Q8NGT0 318 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 OPALINQ96PE5 141 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 SPACA5Q96QH8 159 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 MYCBPQ99417 103 aaPredicted RBP13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 SSX3Q99909 188 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 SEBOXQ9HB31 216 aaPredicted RBP13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 RAB26Q9ULW5 256 aa13.33□□□□□ -0.28
GTF3C2-209ENST00000470115 VWFP04275 2813 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 TRBV2A0A0J9YWF9 115 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 IRGMA1A4Y4 181 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 ZNF728P0DKX0 622 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 PRKACAP17612 351 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 MYF6P23409 242 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 GABRR1P24046 479 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 SNU13P55769 128 aaKnown RBP13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 LGALS4P56470 323 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 EDDM3AQ14507 147 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 BRICD5Q6PL45 260 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 SPSB1Q96BD6 273 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 CITED1Q99966 193 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 ANKRD60Q9BZ19 345 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 CHST6Q9GZX3 395 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 MEGF9Q9H1U4 602 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 C16orf95Q9H693 158 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 INPP5EQ9NRR6 644 aa13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 MRPS18AQ9NVS2 196 aaKnown RBP13.32□□□□□ -0.28
GTF3C2-209ENST00000470115 IGKV1-12A0A0C4DH73 117 aa13.31□□□□□ -0.28
GTF3C2-209ENST00000470115 XPNPEP2O43895 674 aa13.31□□□□□ -0.28
GTF3C2-209ENST00000470115 ZFPL1O95159 310 aa13.31□□□□□ -0.28
GTF3C2-209ENST00000470115 IGKV1D-12P01611 117 aa13.31□□□□□ -0.28
GTF3C2-209ENST00000470115 MT-ND2P03891 347 aa13.31□□□□□ -0.28
GTF3C2-209ENST00000470115 TGFBR2P37173 567 aa13.31□□□□□ -0.28
GTF3C2-209ENST00000470115 GBX2P52951 348 aaPredicted RBP13.31□□□□□ -0.28
GTF3C2-209ENST00000470115 GRK1Q15835 563 aa13.31□□□□□ -0.28
GTF3C2-209ENST00000470115 LY6EQ16553 131 aa13.31□□□□□ -0.28
GTF3C2-209ENST00000470115 TREML4Q6UXN2 200 aa13.31□□□□□ -0.28
GTF3C2-209ENST00000470115 LHFPL4Q7Z7J7 247 aa13.31□□□□□ -0.28
GTF3C2-209ENST00000470115 TPRX1Q8N7U7 411 aa13.31□□□□□ -0.28
GTF3C2-209ENST00000470115 PDCD1LG2Q9BQ51 273 aa13.31□□□□□ -0.28
GTF3C2-209ENST00000470115 PPA2Q9H2U2 334 aa13.31□□□□□ -0.28
GTF3C2-209ENST00000470115 ZCCHC4Q9H5U6 513 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms