RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 THAP10Q9P2Z0 257 aaPredicted RBP6.96□□□□□ -1.29
TPM3-215ENST00000469717 NXT1Q9UKK6 140 aaKnown RBP6.96□□□□□ -1.29
TPM3-215ENST00000469717 MUC22E2RYF6 1773 aaPredicted RBP6.96□□□□□ -1.3
TPM3-215ENST00000469717 ESPL1Q14674 2120 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 CPAMD8Q8IZJ3 1885 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 CNOT4O95628 575 aaKnown RBP6.96□□□□□ -1.3
TPM3-215ENST00000469717 CLPSP04118 112 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 ZNF17P17021 662 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 ZNF25P17030 456 aaPredicted RBP6.96□□□□□ -1.3
TPM3-215ENST00000469717 ATP6V0CP27449 155 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 CD200P41217 278 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 PIGPP57054 158 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 LANCL3Q6ZV70 420 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 C20orf196Q8IYI0 205 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 NECAP1Q8NC96 275 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 TMEM171Q8WVE6 324 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 TXNIPQ9H3M7 391 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 SIRT7Q9NRC8 400 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 PRTFDC1Q9NRG1 225 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 CUTCQ9NTM9 273 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 AK3Q9UIJ7 227 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 SRPK3Q9UPE1 567 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 DOCK11Q5JSL3 2073 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 IGKV1-9A0A0C4DH69 117 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 TLCD2A6NGC4 264 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 HSPB2A8KAH6 182 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 TNFSF14O43557 240 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 CST7O76096 145 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 ZNF20P17024 532 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 CLDN17P56750 224 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 ICAM4Q14773 271 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 KIR2DS3Q14952 304 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 HSPB2Q16082 182 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 OGFOD3Q6PK18 319 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 C16orf47Q6ZP98 133 aaPredicted RBP6.96□□□□□ -1.3
TPM3-215ENST00000469717 OR5D14Q8NGL3 314 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 OR2AJ1Q8NGZ0 328 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 STT3BQ8TCJ2 826 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 SLAMF6Q96DU3 332 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 FAM122AQ96E09 287 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 BCO1Q9HAY6 547 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 TUBD1Q9UJT1 453 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 KCNIP3Q9Y2W7 256 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 WSB1Q9Y6I7 421 aa6.96□□□□□ -1.3
TPM3-215ENST00000469717 BORCS7-ASMTA0A0B4J1R7 106 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 FIGNL2A6NMB9 653 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 GABRR1P24046 479 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 MFAP5Q13361 173 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 P2RY6Q15077 328 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 PRTGQ2VWP7 1150 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 ZNF440Q8IYI8 595 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 EMG1Q92979 244 aaKnown RBP6.95□□□□□ -1.3
TPM3-215ENST00000469717 ZNF845Q96IR2 970 aaPredicted RBP6.95□□□□□ -1.3
TPM3-215ENST00000469717 GPR84Q9NQS5 396 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 PCDH15Q96QU1 1955 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 CACNA1AO00555 2505 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 C17orf105B2RV13 164 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 IFNA21P01568 189 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 NPSP0C0P6 89 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 POU3F1Q03052 451 aaPredicted RBP6.95□□□□□ -1.3
TPM3-215ENST00000469717 SGCBQ16585 318 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 C1orf185Q5T7R7 199 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 MEX3BQ6ZN04 569 aaKnown RBP6.95□□□□□ -1.3
TPM3-215ENST00000469717 C11orf40Q8WZ69 217 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 NDUFAF3Q9BU61 184 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 FSCN3Q9NQT6 498 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 CLEC1BQ9P126 229 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 MMACHCQ9Y4U1 282 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 CACNA1BQ00975 2339 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 TRAV36DV7A0A075B6V5 113 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 NSG1A0A0A6YYJ2 146 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 PLPP3O14495 311 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 GALR2O43603 387 aaPredicted RBP6.95□□□□□ -1.3
TPM3-215ENST00000469717 GSTP1P09211 210 aaKnown RBP6.95□□□□□ -1.3
TPM3-215ENST00000469717 PAX1P15863 534 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 HNRNPA2B1P22626 353 aaKnown RBP6.95□□□□□ -1.3
TPM3-215ENST00000469717 FZD2Q14332 565 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 PDCD1Q15116 288 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 FAM180AQ6UWF9 173 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 FBXW12Q6X9E4 464 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 MRGPRX1Q96LB2 322 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 TWSG1Q9GZX9 223 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 ANAPC10Q9UM13 185 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 SLC7A11Q9UPY5 501 aa6.95□□□□□ -1.3
TPM3-215ENST00000469717 SDK2Q58EX2 2172 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 TMEM265A0A087WTH1 108 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 GPR89AB7ZAQ6 455 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 E5RGE8 158 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 IFNA10P01566 189 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 GPR89BP0CG08 455 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 TMEM225BP0DP42 221 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 PNLIPP16233 465 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 CD33P20138 364 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 TUBG1P23258 451 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 GLIPR1P48060 266 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 CSNK1A1P48729 337 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 RAB11AP62491 216 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 HNF4GQ14541 408 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 SHISA6Q6ZSJ9 500 aa6.94□□□□□ -1.3
TPM3-215ENST00000469717 BATF2Q8N1L9 274 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms