RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 CPT1CQ8TCG5 803 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 ZNF721Q8TF20 911 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 C11orf40Q8WZ69 217 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 MR1Q95460 341 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 PFDN5Q99471 154 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 LANCL2Q9NS86 450 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 MED13Q9UHV7 2174 aa8.36□□□□□ -1.07
HDAC3-205ENST00000469550 PCSK5Q92824 1860 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 A0A1W2PPE2 198 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 CXorf65A6NEN9 183 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 CRYM-AS1A6NIL9 109 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 ARGFXA6NJG6 315 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 SEC14L6B5MCN3 397 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 NME2P1O60361 137 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 NDUFS6O75380 124 aaKnown RBP8.35□□□□□ -1.07
HDAC3-205ENST00000469550 DDAH2O95865 285 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 ITGA3P26006 1051 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 CHATP28329 748 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 OR3A4PP47883 348 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 UQCRFS1P47985 274 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 GABRA4P48169 554 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 ZNF616Q08AN1 781 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 CHRFAM7AQ494W8 412 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 PYY3Q5JQD4 70 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 NCMAPQ5T1S8 102 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 GGNBP1Q5YKI7 109 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 FOXRED2Q8IWF2 684 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 PRR22Q8IZ63 422 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 LRTM2Q8N967 370 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 OR51E1Q8TCB6 317 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 TMEM234Q8WY98 164 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 ERGIC1Q969X5 290 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 MUCL1Q96DR8 90 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 DNAJA3Q96EY1 480 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 C20orf24Q9BUV8 137 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 ST6GALNAC5Q9BVH7 336 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 TM2D1Q9BX74 207 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 OR8D2Q9GZM6 311 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 CHRNA10Q9GZZ6 450 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 BANF2Q9H503 90 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 PNO1Q9NRX1 252 aaKnown RBP8.35□□□□□ -1.07
HDAC3-205ENST00000469550 UFSP2Q9NUQ7 469 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 GAR1Q9NY12 217 aaKnown RBP8.35□□□□□ -1.07
HDAC3-205ENST00000469550 ALPK2Q86TB3 2170 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 IGKV3D-11A0A0A0MRZ8 115 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 IGKV1D-43A0A0B4J1Z2 117 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 SDCBPO00560 298 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-205ENST00000469550 CRTAPO75718 401 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-205ENST00000469550 F10P00742 488 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 KNG1P01042 644 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 FREM3P0C091 2139 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 GNLYP22749 145 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 SOHLH1Q5JUK2 328 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 ZNF385CQ66K41 422 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-205ENST00000469550 RNF144BQ7Z419 303 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 SULF2Q8IWU5 870 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 CD300LFQ8TDQ1 290 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 SMIM3Q9BZL3 60 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 OR11A1Q9GZK7 315 aa8.35□□□□□ -1.07
HDAC3-205ENST00000469550 LSM5Q9Y4Y9 91 aaKnown RBP8.35□□□□□ -1.07
HDAC3-205ENST00000469550 BTBD17A6NE02 478 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 IFITM10A6NMD0 228 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 TMEM150CB9EJG8 249 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 ZNF878C9JN71 531 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 RPL36A-HNRNPH2H7BZ11 118 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 GMFGO60234 142 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 HCKP08631 526 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 HIST1H1BP16401 226 aaKnown RBP8.34□□□□□ -1.07
HDAC3-205ENST00000469550 ZNF17P17021 662 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 RRADP55042 308 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 HSF1Q00613 529 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 PLCXD2Q0VAA5 305 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 CHAF1BQ13112 559 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 IL13RA2Q14627 380 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 HIKESHIQ53FT3 197 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 HLA-DQA1Q5Y7H0 255 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 LCN10Q6JVE6 187 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 DOK3Q7L591 496 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 SLC16A14Q7RTX9 510 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.34□□□□□ -1.07
HDAC3-205ENST00000469550 Q8NA96 180 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 OR51T1Q8NGJ9 327 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 OR13D1Q8NGV5 346 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 OR1L3Q8NH93 324 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 HPSE2Q8WWQ2 592 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 ST8SIA1Q92185 356 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 GTF3AQ92664 365 aaKnown RBP8.34□□□□□ -1.07
HDAC3-205ENST00000469550 SGK3Q96BR1 496 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 GALNT14Q96FL9 552 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 PECRQ9BY49 303 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 WFDC1Q9HC57 220 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 SOHLH2Q9NX45 425 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 KCNIP3Q9Y2W7 256 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 FER1L5A0AVI2 2057 aa8.34□□□□□ -1.07
HDAC3-205ENST00000469550 ELOA3CA0A087WX78 387 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-205ENST00000469550 A0A1W2PP11 408 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 K7N7A8 449 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 AGFG2O95081 481 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 IFNA10P01566 189 aa8.33□□□□□ -1.08
HDAC3-205ENST00000469550 MBPP02686 304 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms