RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 SLC25A38Q96DW6 304 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 IGKV3D-11A0A0A0MRZ8 115 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 C5orf51A6NDU8 294 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 ADAP1O75689 374 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 LCATP04180 440 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 IRF2P14316 349 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 CD34P28906 385 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 SSR4P51571 173 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 DVL1P1P54792 670 aaPredicted RBP10.85□□□□□ -0.67
USP11-206ENST00000469080 SPEM2Q0P670 501 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 FBXW9Q5XUX1 488 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 M1APQ8TC57 530 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 PIK3IP1Q96FE7 263 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 GALNT14Q96FL9 552 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 RCC1LQ96I51 464 aaKnown RBP10.85□□□□□ -0.67
USP11-206ENST00000469080 ZNF426Q9BUY5 554 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 MFRPQ9BY79 579 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 CALHM2Q9HA72 323 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 PILRBQ9UKJ0 227 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 TLN1Q9Y490 2541 aaKnown RBP10.85□□□□□ -0.67
USP11-206ENST00000469080 LRP3O75074 770 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 CST2P09228 141 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 TRGC1P0CF51 173 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 PRSS3P35030 304 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 LPAR6P43657 344 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 CSNK1A1P48729 337 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 NOVA1P51513 510 aaKnown RBP10.85□□□□□ -0.67
USP11-206ENST00000469080 RPS11P62280 158 aaKnown RBP eCLIP10.85□□□□□ -0.67
USP11-206ENST00000469080 IGLV3-21P80748 117 aaPredicted RBP10.85□□□□□ -0.67
USP11-206ENST00000469080 IL10RAQ13651 578 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 HMGN3Q15651 99 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 DNLZQ5SXM8 178 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 ABLIM2Q6H8Q1 611 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 WDR74Q6RFH5 385 aaPredicted RBP10.85□□□□□ -0.67
USP11-206ENST00000469080 C1QL4Q86Z23 238 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 C4orf45Q96LM5 186 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 ULBP2Q9BZM5 246 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 KCNJ16Q9NPI9 418 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 PRR13Q9NZ81 148 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 ABRACLQ9P1F3 81 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 RHBDD3Q9Y3P4 386 aa10.85□□□□□ -0.67
USP11-206ENST00000469080 A0A0G2JK05 382 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 A0A0G2JMM0 328 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 A0A1W2PPB8 328 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 A0A1W2PR80 420 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 A0A1W2PRS3 328 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 LNP1A1A4G5 178 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 OR4C45A6NMZ5 311 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 KIR3DP1A8MWS1 328 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 IGHG1P01857 330 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 B4GALT1P15291 398 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 GABRR1P24046 479 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 UBE2KP61086 200 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 ZNF345Q14585 488 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 CSRP2Q16527 193 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 DCAF12Q5T6F0 453 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 RNF144BQ7Z419 303 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 RTN4RL2Q86UN3 420 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 C20orf196Q8IYI0 205 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 ARHGEF39Q8N4T4 335 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 OR4C16Q8NGL9 310 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 POFUT1Q9H488 388 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 C12orf49Q9H741 205 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 GPR84Q9NQS5 396 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.84□□□□□ -0.67
USP11-206ENST00000469080 EFNA2O43921 213 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 GGCTO75223 188 aaKnown RBP10.84□□□□□ -0.67
USP11-206ENST00000469080 CER1O95813 267 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 SCGB1D1O95968 90 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 OR4A8P0C604 315 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 DAP3P51398 398 aaKnown RBP10.84□□□□□ -0.67
USP11-206ENST00000469080 SOX8P57073 446 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 ZNF616Q08AN1 781 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 SYS1Q8N2H4 156 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 OR8B4Q96RC9 309 aa10.84□□□□□ -0.67
USP11-206ENST00000469080 MS4A18H0YCH9 400 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 SDCBPO00560 298 aaPredicted RBP10.83□□□□□ -0.67
USP11-206ENST00000469080 ANGPTL7O43827 346 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 GPRIN2O60269 458 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 UPK3AO75631 287 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 TSPAN15O95858 294 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 CYB5AP00167 134 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 GNB3P16520 340 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 RPS23P62266 143 aaKnown RBP10.83□□□□□ -0.67
USP11-206ENST00000469080 MS4A18Q3C1V0 323 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 MOGAT2Q3SYC2 334 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 LY6G6FQ5SQ64 297 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 TMEM164Q5U3C3 297 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 EIF5AL1Q6IS14 154 aaKnown RBP10.83□□□□□ -0.67
USP11-206ENST00000469080 FAHD2BQ6P2I3 314 aaPredicted RBP10.83□□□□□ -0.67
USP11-206ENST00000469080 OR52N4Q8NGI2 321 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 OR52N5Q8NH56 324 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 ZNF837Q96EG3 531 aaPredicted RBP10.83□□□□□ -0.67
USP11-206ENST00000469080 FAHD2AQ96GK7 314 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 C1orf198Q9H425 327 aa10.83□□□□□ -0.67
USP11-206ENST00000469080 TMEM212A6NML5 194 aa10.83□□□□□ -0.68
USP11-206ENST00000469080 ZNF878C9JN71 531 aa10.83□□□□□ -0.68
USP11-206ENST00000469080 OR8U9P0C7N5 309 aa10.83□□□□□ -0.68
USP11-206ENST00000469080 PAX1P15863 534 aa10.83□□□□□ -0.68
USP11-206ENST00000469080 ERVFC1-1P60608 527 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms