RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 SPRNQ5BIV9 151 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 UBE2NLQ5JXB2 153 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 AVPI1Q5T686 147 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 FOXB2Q5VYV0 432 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 ACP7Q6ZNF0 438 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 SLC36A1Q7Z2H8 476 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 NR2C2APQ86WQ0 139 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 LRRC75A-AS1Q8N1F1 130 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 GCSAMQ8N6F7 178 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 SAMD12Q8N8I0 201 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 ASCC1Q8N9N2 400 aaKnown RBP6.83□□□□□ -1.32
HDAC6-216ENST00000468949 DEFB108BQ8NET1 73 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 OR56B1Q8NGI3 324 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 PPP1R35Q8TAP8 253 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 YIPF5Q969M3 257 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 NEDD4LQ96PU5 975 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 ATG5Q9H1Y0 275 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 KCNK15Q9H427 330 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 NARFLQ9H6Q4 476 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 SPACA1Q9HBV2 294 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 HMG20AQ9NP66 347 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 MTCH1Q9NZJ7 389 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 SPATA2Q9UM82 520 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 ST3GAL6Q9Y274 331 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 WIPI2Q9Y4P8 454 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 ABCA4P78363 2273 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 CSMD1Q96PZ7 3565 aa6.83□□□□□ -1.32
HDAC6-216ENST00000468949 RFPL4AA6NLU0 287 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 OR2AT4A6NND4 320 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 RFPL4AL1F8VTS6 287 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 DEGS1O15121 323 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 NDUFA2O43678 99 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 RP2O75695 350 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 HAND1O96004 215 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 PAHP00439 452 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 GYPAP02724 150 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 SFTPBP07988 381 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 ACAA1P09110 424 aaPredicted RBP6.82□□□□□ -1.32
HDAC6-216ENST00000468949 PAX1P15863 534 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 RPS2P15880 293 aaKnown RBP6.82□□□□□ -1.32
HDAC6-216ENST00000468949 EGR1P18146 543 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 COL8A2P25067 703 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 PMELP40967 661 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 NPBWR2P48146 333 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 PITPNBP48739 271 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 RPS27AP62979 156 aaKnown RBP6.82□□□□□ -1.32
HDAC6-216ENST00000468949 CLEC12BQ2HXU8 276 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 MPV17LQ2QL34 196 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 CNPY1Q3B7I2 92 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 PIGYQ3MUY2 71 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 NKAPLQ5M9Q1 402 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 Q5PR19 223 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 ATAD3CQ5T2N8 411 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 ELP2Q6IA86 826 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 OR10K2Q6IF99 312 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 RAB12Q6IQ22 244 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 FAM166AQ6J272 317 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 RNF144BQ7Z419 303 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 C1QL2Q7Z5L3 287 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 C11orf53Q8IXP5 236 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 CHST4Q8NCG5 386 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 C19orf18Q8NEA5 215 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 TMEM185AQ8NFB2 350 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 OR8B3Q8NGG8 313 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 IGFBPL1Q8WX77 278 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 RAB40AQ8WXH6 277 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 PTX4Q96A99 478 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 OR8B2Q96RD0 313 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 BARHL1Q9BZE3 327 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 WDR13Q9H1Z4 485 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 DIABLOQ9NR28 239 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 RHBDL2Q9NX52 303 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 PTTG2Q9NZH5 202 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 OR5V1Q9UGF6 321 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 ROS1P08922 2347 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 AKAP6Q13023 2319 aa6.82□□□□□ -1.32
HDAC6-216ENST00000468949 DSCAMO60469 2012 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 F8P00451 2351 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 A0A1W2PP11 408 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FAM90A10PA6NDY2 464 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FAM90A18PA6NE21 464 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FAM90A16PA6NEW6 464 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FAM90A20PA6NIJ5 464 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FAM90A8PA6NJQ4 464 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FAM90A7PA6NKC0 464 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FAM90A22PA8MWA6 464 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 TMEM14DPA8MWL7 114 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FAM90A12PA8MX19 464 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FAM90A5PA8MXJ8 464 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FAM90A23PA8MXZ1 464 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 SIRPB1O00241 398 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 HSPB6O14558 160 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 GEMIN2O14893 280 aaKnown RBP6.81□□□□□ -1.32
HDAC6-216ENST00000468949 TMPRSS2O15393 492 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 ADAM20O43506 726 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 LHBP01229 141 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 CHRM2P08172 466 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FAM90A15PP0C7V4 464 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FAM90A13PP0C7W8 464 aa6.81□□□□□ -1.32
HDAC6-216ENST00000468949 FAM90A14PP0C7W9 464 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms