RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 AASSQ9UDR5 926 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 IGKV1-9A0A0C4DH69 117 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 hADV38S2A0JD32 116 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 SNTNA6NMZ2 147 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 CHST1O43916 411 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 IGHV1-8P0DP01 117 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 KIR2DS4P43632 304 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 RAB13P51153 203 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 SNRPGP62308 76 aaKnown RBP17.64■□□□□ 0.41
TTC28-204ENST00000468807 SSX2Q16385 188 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 HIST2H2BDQ6DRA6 164 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 LHFPL2Q6ZUX7 228 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 DYNAPQ8N1N2 210 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 CBR4Q8N4T8 237 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 OR13C3Q8NGS6 347 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 FOXRED1Q96CU9 486 aaPredicted RBP17.64■□□□□ 0.41
TTC28-204ENST00000468807 C4orf36Q96KX1 117 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 OPALINQ96PE5 141 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 GLS2Q9UI32 602 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 FOXJ3Q9UPW0 622 aa17.64■□□□□ 0.41
TTC28-204ENST00000468807 TBL2Q9Y4P3 447 aaKnown RBP17.64■□□□□ 0.41
TTC28-204ENST00000468807 TRBV2A0A0J9YWF9 115 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 H3BNX3 289 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 RBP4P02753 201 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 CSF1P09603 554 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 VSIG10L2P0DP72 767 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 EFNB2P52799 333 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 MEF2CQ06413 473 aaPredicted RBP17.63■□□□□ 0.41
TTC28-204ENST00000468807 HERPUD1Q15011 391 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 ZFP1Q6P2D0 407 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 LIAT1Q6ZQX7 453 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 TRAPPC6BQ86SZ2 158 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 ACBD7Q8N6N7 88 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 KLHDC1Q8N7A1 406 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 ZNF676Q8N7Q3 588 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 OR52N4Q8NGI2 321 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 PIFOQ8TCI5 191 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 RANBP3Q9H6Z4 567 aaPredicted RBP17.63■□□□□ 0.41
TTC28-204ENST00000468807 NEK6Q9HC98 313 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 HHLA2Q9UM44 414 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 GMPPBQ9Y5P6 360 aa17.63■□□□□ 0.41
TTC28-204ENST00000468807 FAM90A8PA6NJQ4 464 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 J3QRE1 110 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 SIRPB1O00241 398 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 ISG15P05161 165 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 ACTA2P62736 377 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 ACTG2P63267 376 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 ZNF91Q05481 1191 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 SLC25A30Q5SVS4 291 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 C11orf88Q6PI97 169 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 CRIP3Q6Q6R5 217 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 CCDC121Q6ZUS5 278 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 UTS2BQ765I0 119 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 TCF23Q7RTU1 214 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 OR4S1Q8NGB4 309 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 OR51A4Q8NGJ6 313 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 OR5D18Q8NGL1 313 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 OR10AC1Q8NH08 325 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 SPSB1Q96BD6 273 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 MRPL48Q96GC5 212 aaKnown RBP17.62■□□□□ 0.41
TTC28-204ENST00000468807 SPACA5Q96QH8 159 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 GSTK1Q9Y2Q3 226 aa17.62■□□□□ 0.41
TTC28-204ENST00000468807 PRKDCP78527 4128 aaKnown RBP17.61■□□□□ 0.41
TTC28-204ENST00000468807 ODF3BA8MYP8 253 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 PSPNO60542 156 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 PDZK1IP1Q13113 114 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 ZNF626Q68DY1 528 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 FDX2Q6P4F2 183 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 LHFPL3Q86UP9 236 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 TMEM219Q86XT9 240 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 C1QL4Q86Z23 238 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 OR11H6Q8NGC7 330 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 OR13C9Q8NGT0 318 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 NDNFQ8TB73 568 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 RPS4Y2Q8TD47 263 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 LGALS12Q96DT0 336 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 MALSU1Q96EH3 234 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 PELI1Q96FA3 418 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 MBOAT4Q96T53 435 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 ALG8Q9BVK2 526 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 TCF19Q9Y242 345 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 HILPDAQ9Y5L2 63 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 LINC00312Q9Y6C7 94 aa17.61■□□□□ 0.41
TTC28-204ENST00000468807 VGLL3A8MV65 326 aa17.6■□□□□ 0.41
TTC28-204ENST00000468807 CCR9P51686 369 aa17.6■□□□□ 0.41
TTC28-204ENST00000468807 ALKBH1Q13686 389 aaKnown RBP17.6■□□□□ 0.41
TTC28-204ENST00000468807 ZNF146Q15072 292 aa17.6■□□□□ 0.41
TTC28-204ENST00000468807 SPIN3Q5JUX0 258 aa17.6■□□□□ 0.41
TTC28-204ENST00000468807 EXOSC4Q9NPD3 245 aaKnown RBP17.6■□□□□ 0.41
TTC28-204ENST00000468807 EXOGQ9Y2C4 368 aaKnown RBP17.6■□□□□ 0.41
TTC28-204ENST00000468807 SESN1Q9Y6P5 492 aa17.6■□□□□ 0.41
TTC28-204ENST00000468807 F2RL2O00254 374 aa17.59■□□□□ 0.41
TTC28-204ENST00000468807 SH2D1BO14796 132 aa17.59■□□□□ 0.41
TTC28-204ENST00000468807 MGST3O14880 152 aa17.59■□□□□ 0.41
TTC28-204ENST00000468807 OR3A1P47881 315 aa17.59■□□□□ 0.41
TTC28-204ENST00000468807 SLC34A1Q06495 639 aa17.59■□□□□ 0.41
TTC28-204ENST00000468807 SCN1BQ07699 218 aa17.59■□□□□ 0.41
TTC28-204ENST00000468807 HABP2Q14520 560 aaPredicted RBP17.59■□□□□ 0.41
TTC28-204ENST00000468807 ARSJQ5FYB0 599 aaPredicted RBP17.59■□□□□ 0.41
TTC28-204ENST00000468807 LDLRAD2Q5SZI1 272 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms