RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 TAAR6Q96RI8 345 aa6.53□□□□□ -1.36
COL6A3-208ENST00000468792 SULT4A1Q9BR01 284 aa6.53□□□□□ -1.36
COL6A3-208ENST00000468792 FAAP24Q9BTP7 215 aa6.53□□□□□ -1.36
COL6A3-208ENST00000468792 CHIAQ9BZP6 476 aa6.53□□□□□ -1.36
COL6A3-208ENST00000468792 FGF23Q9GZV9 251 aaPredicted RBP6.53□□□□□ -1.36
COL6A3-208ENST00000468792 OR51I2Q9H344 312 aa6.53□□□□□ -1.36
COL6A3-208ENST00000468792 ZNF286AQ9HBT8 521 aa6.53□□□□□ -1.36
COL6A3-208ENST00000468792 FAM86C1Q9NVL1 165 aa6.53□□□□□ -1.36
COL6A3-208ENST00000468792 TREM2Q9NZC2 230 aa6.53□□□□□ -1.36
COL6A3-208ENST00000468792 EHFQ9NZC4 300 aa6.53□□□□□ -1.36
COL6A3-208ENST00000468792 GPR160Q9UJ42 338 aa6.53□□□□□ -1.36
COL6A3-208ENST00000468792 CELSR3Q9NYQ7 3312 aa6.53□□□□□ -1.36
COL6A3-208ENST00000468792 CEP250Q9BV73 2442 aa6.52□□□□□ -1.36
COL6A3-208ENST00000468792 LRP5LA4QPB2 252 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 LINC00862A6NCI5 91 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 TRAPPC2LH3BP13 241 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 J3QT63 122 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 L7N2F9 121 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 NOS1APO75052 506 aaPredicted RBP6.52□□□□□ -1.37
COL6A3-208ENST00000468792 TNFSF13O75888 250 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 OR2F2O95006 317 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 DIRAS3O95661 229 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 CSN2P05814 226 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 OR5H8P0DN80 308 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 LYL1P12980 280 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 CXCL2P19875 107 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 HAAOP46952 286 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 UCP2P55851 309 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 ARPC4P59998 168 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 SUPT4H1P63272 117 aaKnown RBP6.52□□□□□ -1.37
COL6A3-208ENST00000468792 OR2F1Q13607 317 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 HLXQ14774 488 aaPredicted RBP6.52□□□□□ -1.37
COL6A3-208ENST00000468792 PIGYQ3MUY2 71 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 CLLU1Q5K131 121 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 DCAF12L2Q5VW00 463 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 C11orf87Q6NUJ2 197 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 CLEC18BQ6UXF7 455 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 BEND4Q6ZU67 534 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 SLC7A5P1Q8MH63 180 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 LRTM2Q8N967 370 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 WDR31Q8NA23 367 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 SPERTQ8NA61 448 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 ADAD2Q8NCV1 583 aaKnown RBP6.52□□□□□ -1.37
COL6A3-208ENST00000468792 OR8H1Q8NGG4 311 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 STARD4Q96DR4 205 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 ELMOD3Q96FG2 381 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 GALNT14Q96FL9 552 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 MICU1Q9BPX6 476 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 RTL8AQ9BWD3 113 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 BCL2L14Q9BZR8 327 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 CDH20Q9HBT6 801 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 ZNF71Q9NQZ8 489 aaPredicted RBP6.52□□□□□ -1.37
COL6A3-208ENST00000468792 MTCH1Q9NZJ7 389 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 COMMD9Q9P000 198 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 C14orf166Q9Y224 244 aaKnown RBP6.52□□□□□ -1.37
COL6A3-208ENST00000468792 POLDIP2Q9Y2S7 368 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 AMDHD2Q9Y303 409 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 MAB21L2Q9Y586 359 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 AUP1Q9Y679 476 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 DOCK7Q96N67 2140 aa6.52□□□□□ -1.37
COL6A3-208ENST00000468792 ASPMQ8IZT6 3477 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 IGKV1D-8A0A087WSZ0 117 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 TRAV14DV4A0A0A6YYC5 116 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 PIGBOS1A0A0B4J2F0 54 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 KIR2DS1A0A191URI9 304 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 CRYM-AS1A6NIL9 109 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 C1QTNF9BB2RNN3 333 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 MKRN2OSH3BPM6 223 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 H7C1Q1 480 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 MSTNO14793 375 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 B3GALNT1O75752 331 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 OR7C1O76099 320 aaPredicted RBP6.51□□□□□ -1.37
COL6A3-208ENST00000468792 TOXO94900 526 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 SIX6O95475 246 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 MPC2O95563 127 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 WNT2P09544 360 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 CCL2P13500 99 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 AKR1C4P17516 323 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 BCL3P20749 454 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 KITLGP21583 273 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 SDHBP21912 280 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 HOXC12P31275 282 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 MDH2P40926 338 aaKnown RBP6.51□□□□□ -1.37
COL6A3-208ENST00000468792 KIR2DS4P43632 304 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 NPBWR2P48146 333 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 NPY4RP50391 375 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 GPM6AP51674 278 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 ERVK11-1P61568 191 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 PPP1CBP62140 327 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 IL15RAQ13261 267 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 RBM39Q14498 530 aaKnown RBP6.51□□□□□ -1.37
COL6A3-208ENST00000468792 KIR2DS1Q14954 304 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 ESCO2Q56NI9 601 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 DMRTC1Q5HYR2 192 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 NKAPLQ5M9Q1 402 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 MBNL2Q5VZF2 373 aaKnown RBP6.51□□□□□ -1.37
COL6A3-208ENST00000468792 ZNF324BQ6AW86 544 aaPredicted RBP6.51□□□□□ -1.37
COL6A3-208ENST00000468792 ZNF880Q6PDB4 577 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 GSG1LQ6UXU4 331 aa6.51□□□□□ -1.37
COL6A3-208ENST00000468792 C17orf107Q6ZR85 190 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms