RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ZNF672Q499Z4 452 aaPredicted RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 TMEM255AQ5JRV8 349 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 C1QTNF12Q5T7M4 302 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 PRAMEF6Q5VXH4 476 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 AWAT2Q6E213 333 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 ASPHD2Q6ICH7 369 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 OR10K2Q6IF99 312 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 TMEM88Q6PEY1 159 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 GLIPR1L1Q6UWM5 242 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 TPRA1Q86W33 373 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 C1orf174Q8IYL3 243 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 ZDHHC23Q8IYP9 409 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 FBXL14Q8N1E6 418 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 ZCCHC24Q8N2G6 241 aaKnown RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 FTMTQ8N4E7 242 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 PARP16Q8N5Y8 322 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 NUP37Q8NFH4 326 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 OR8G5Q8NG78 346 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 OR10AD1Q8NGE0 317 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 OR51D1Q8NGF3 324 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 OR5H6Q8NGV6 325 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 OR10K1Q8NGX5 313 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 OR13G1Q8NGZ3 307 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 LILRB1Q8NHL6 650 aaPredicted RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 MCFD2Q8NI22 146 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 DYNC2LI1Q8TCX1 351 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 TNFAIP8L1Q8WVP5 186 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 PP6455Q8WZ26 134 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 THRSPQ92748 146 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 TRIM63Q969Q1 353 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 MRPL24Q96A35 216 aaKnown RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 CEP19Q96LK0 163 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 GFI1Q99684 422 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 BCL7BQ9BQE9 202 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 ADAT1Q9BUB4 502 aaKnown RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 BARHL1Q9BZE3 327 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 CXXC4Q9H2H0 198 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 KCNK15Q9H427 330 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 HEATR1Q9H583 2144 aaKnown RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 OPA3Q9H6K4 179 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 SEPSECSQ9HD40 501 aaKnown RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 DYNLRB1Q9NP97 96 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 TMEM138Q9NPI0 162 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 TUBG2Q9NRH3 451 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 UFSP2Q9NUQ7 469 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 NKIRAS2Q9NYR9 191 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 MRPL15Q9P015 296 aaKnown RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 BOD1L1Q8NFC6 3051 aa3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 DIDO1Q9BTC0 2240 aaKnown RBP3.45□□□□□ -1.86
TMEM39A-204ENST00000468545 NBEAQ8NFP9 2946 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 IGKV1-27A0A075B6S5 117 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 A0A0G2JK05 382 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 hCG_1807616A0A1W2PRN6 198 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 ZSCAN5BA6NJL1 495 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 IFITM5A6NNB3 132 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 A6NNC1 897 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 B9A039 149 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 RRHO14718 337 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 CDIPTO14735 213 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 MLNRO43193 412 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 SYNGR1O43759 233 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 HPGDSO60760 199 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 CRTAPO75718 401 aaPredicted RBP3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 CYB5AP00167 134 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 PAHP00439 452 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 IGHV3-13P01766 116 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 ALDOBP05062 364 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 PRF1P14222 555 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF250P15622 560 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 ARSBP15848 533 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 SERPINA2P20848 420 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 KITLGP21583 273 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 LOXP28300 417 aaPredicted RBP3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 HTR2CP28335 458 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 S100A5P33763 92 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 HAAOP46952 286 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 RBP2P50120 134 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 MMP15P51511 669 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 BMXP51813 675 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 GNG3P63215 75 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 TNFAIP6P98066 277 aaPredicted RBP3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 SCN1BQ07699 218 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 PLA2G7Q13093 441 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 DAZAP2Q15038 168 aaPredicted RBP3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 RSU1Q15404 277 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 KISS1Q15726 138 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 CEACAM21Q3KPI0 293 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF404Q494X3 552 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 SPRNQ5BIV9 151 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 TMEM42Q69YG0 159 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 HIST2H2BCQ6DN03 193 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 SFXN4Q6P4A7 337 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 HAGHLQ6PII5 290 aaPredicted RBP3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 Q6ZR03 302 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 Q6ZSR3 168 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF826PQ6ZT77 177 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 SLC25A26Q70HW3 274 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 UTS2BQ765I0 119 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 C1QL2Q7Z5L3 287 aa3.44□□□□□ -1.86
TMEM39A-204ENST00000468545 TMEM200AQ86VY9 491 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms