RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 PRDX2P32119 198 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 GABRA2P47869 451 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 RORCP51449 518 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 RBM11P57052 281 aaKnown RBP12.7□□□□□ -0.38
SNIP1-202ENST00000468040 SCAND1P57086 179 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 LOXL1Q08397 574 aaPredicted RBP12.7□□□□□ -0.38
SNIP1-202ENST00000468040 MPV17LQ2QL34 196 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 C2orf76Q3KRA6 126 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 IDNKQ5T6J7 187 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 OR51D1Q8NGF3 324 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 CLDND2Q8NHS1 167 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 FAM46BQ96A09 425 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 NEIL1Q96FI4 390 aaPredicted RBP12.7□□□□□ -0.38
SNIP1-202ENST00000468040 SDSLQ96GA7 329 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 POM121Q96HA1 1249 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 MED30Q96HR3 178 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 TMEM59Q9BXS4 323 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 PATZ1Q9HBE1 687 aaKnown RBP12.7□□□□□ -0.38
SNIP1-202ENST00000468040 IL36RNQ9UBH0 155 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 OR14J1Q9UGF5 321 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 ZNF222Q9UK12 451 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 ST3GAL6Q9Y274 331 aa12.7□□□□□ -0.38
SNIP1-202ENST00000468040 NOTCH2Q04721 2471 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 A0A096LNT2 108 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 A0A1W2PP11 408 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 DPPA5A6NC42 116 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 TMEM14DPA8MWL7 114 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 H3BUI4 141 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 SH2D1BO14796 132 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 MPIG6BO95866 241 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 HAND1O96004 215 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 IGHV2-5P01817 119 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 CHRM2P08172 466 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 SNU13P55769 128 aaKnown RBP12.69□□□□□ -0.38
SNIP1-202ENST00000468040 IL13RA1P78552 427 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 QRFPP83859 136 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 SPCS2Q15005 226 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 FAM189A2Q15884 450 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 PIGYQ3MUY2 71 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 ZNF788Q6ZQV5 615 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 ZNF561Q8N587 486 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 CHST4Q8NCG5 386 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 TMEM104Q8NE00 496 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 OR8B3Q8NGG8 313 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 KCTD12Q96CX2 325 aaKnown RBP12.69□□□□□ -0.38
SNIP1-202ENST00000468040 OR8B2Q96RD0 313 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 CCL13Q99616 98 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 URM1Q9BTM9 101 aaKnown RBP12.69□□□□□ -0.38
SNIP1-202ENST00000468040 SELENOIQ9C0D9 397 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 BANF2Q9H503 90 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 ABRACLQ9P1F3 81 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 ETV7Q9Y603 341 aa12.69□□□□□ -0.38
SNIP1-202ENST00000468040 FAM90A10PA6NDY2 464 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 FAM90A18PA6NE21 464 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 FAM90A16PA6NEW6 464 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 FAM90A20PA6NIJ5 464 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 FAM90A8PA6NJQ4 464 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 FAM90A7PA6NKC0 464 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 CYSRT1A8MQ03 144 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 FAM90A22PA8MWA6 464 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 FAM90A12PA8MX19 464 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 FAM90A5PA8MXJ8 464 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 FAM90A23PA8MXZ1 464 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 F5H0A9 414 aaPredicted RBP12.68□□□□□ -0.38
SNIP1-202ENST00000468040 LDLRAD4O15165 306 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 SIGLEC5O15389 551 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 WNT2P09544 360 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 FAM90A15PP0C7V4 464 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 FAM90A13PP0C7W8 464 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 FAM90A14PP0C7W9 464 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 FAM90A24PP0C7X0 464 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 AMY2BP19961 511 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 DUSP1P28562 367 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 SOX6P35712 828 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 NPY4RP50391 375 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 LMO4P61968 165 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 IKZF1Q13422 519 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 UNC119Q13432 240 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 OR10K2Q6IF99 312 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 LYPD2Q6UXB3 125 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 SPNS3Q6ZMD2 512 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 CD177Q8N6Q3 437 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 AP3S1Q92572 193 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 PTX4Q96A99 478 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 DGCR14Q96DF8 476 aaKnown RBP12.68□□□□□ -0.38
SNIP1-202ENST00000468040 GAFA1Q96PS6 74 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 RAB22AQ9UL26 194 aa12.68□□□□□ -0.38
SNIP1-202ENST00000468040 A0A0B4J203 849 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 TMEM272A0A1B0GTI8 110 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 GEMIN2O14893 280 aaKnown RBP12.67□□□□□ -0.38
SNIP1-202ENST00000468040 DEGS1O15121 323 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 NDUFB3O43676 98 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 OR7C1O76099 320 aaPredicted RBP12.67□□□□□ -0.38
SNIP1-202ENST00000468040 OR2H2O95918 312 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 ZNF44P15621 663 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 RAB6AP20340 208 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 LMO1P25800 156 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 PITPNBP48739 271 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 CEBPDP49716 269 aaPredicted RBP12.67□□□□□ -0.38
SNIP1-202ENST00000468040 RPS27AP62979 156 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms