RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 GIMAP1Q8WWP7 306 aa12.49□□□□□ -0.41
DDX56-208ENST00000467318 DACT3Q96B18 629 aaPredicted RBP12.49□□□□□ -0.41
DDX56-208ENST00000467318 ORAI1Q96D31 301 aa12.49□□□□□ -0.41
DDX56-208ENST00000467318 SORCS2Q96PQ0 1159 aa12.49□□□□□ -0.41
DDX56-208ENST00000467318 C20orf85Q9H1P6 137 aa12.49□□□□□ -0.41
DDX56-208ENST00000467318 ASH1LQ9NR48 2969 aaKnown RBP12.49□□□□□ -0.41
DDX56-208ENST00000467318 APCP25054 2843 aa12.49□□□□□ -0.41
DDX56-208ENST00000467318 TRAV8-7A0A075B6U6 113 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 PQLC2LA1A4F0 135 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 F12P00748 615 aaPredicted RBP12.48□□□□□ -0.41
DDX56-208ENST00000467318 EFNA4P52798 201 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 CAPZA1P52907 286 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 ATP1B3P54709 279 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 TAS2R20P59543 309 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 MRPS11P82912 194 aaKnown RBP12.48□□□□□ -0.41
DDX56-208ENST00000467318 DMRTC1Q5HYR2 192 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 LAMTOR1Q6IAA8 161 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 DNM1P46Q6ZS02 220 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 CDH26Q8IXH8 852 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 C9orf62Q8N4C0 152 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 NKAIN3Q8N8D7 197 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 OR11H7Q8NGC8 314 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 OR51A2Q8NGJ7 313 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 ITLN1Q8WWA0 313 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 LURAP1Q96LR2 239 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 PLEKHA6Q9Y2H5 1048 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 FAM230AA0A1W2PPH8 454 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 LRP5LA4QPB2 252 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 RBBP9O75884 186 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 HCKP08631 526 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 CSF1P09603 554 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 CDK2P24941 298 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 MTCP1P56278 107 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 ZNF154Q13106 437 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 THOC7Q6I9Y2 204 aaKnown RBP12.48□□□□□ -0.41
DDX56-208ENST00000467318 IZUMO1Q8IYV9 350 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 NPRL2Q8WTW4 380 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 GSX2Q9BZM3 304 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 OR51I2Q9H344 312 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 AUNIPQ9H7T9 357 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 BEX4Q9NWD9 120 aaPredicted RBP12.48□□□□□ -0.41
DDX56-208ENST00000467318 MGAT4AQ9UM21 535 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 PPP1R3CQ9UQK1 317 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 NPTNQ9Y639 398 aa12.48□□□□□ -0.41
DDX56-208ENST00000467318 USF3Q68DE3 2245 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 SNRPGP15A8MWD9 76 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 IFNL4K9M1U5 179 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 HPXP02790 462 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 MAS1P04201 325 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 GRPP07492 148 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 ADRA2CP18825 462 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 HAAOP46952 286 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 MECP2P51608 486 aaKnown RBP12.47□□□□□ -0.41
DDX56-208ENST00000467318 KISS1Q15726 138 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 RAB11BQ15907 218 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 GLT8D1Q68CQ7 371 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 SPICQ8N5J4 248 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 OR52N4Q8NGI2 321 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 SNAPC3Q92966 411 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 FOXRED1Q96CU9 486 aaPredicted RBP12.47□□□□□ -0.41
DDX56-208ENST00000467318 MBD6Q96DN6 1003 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 FGF23Q9GZV9 251 aaPredicted RBP12.47□□□□□ -0.41
DDX56-208ENST00000467318 TLNRD1Q9H1K6 362 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 FN3KRPQ9HA64 309 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 BARX1Q9HBU1 254 aaPredicted RBP12.47□□□□□ -0.41
DDX56-208ENST00000467318 GCM1Q9NP62 436 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 DLL4Q9NR61 685 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 CSMD1Q96PZ7 3565 aa12.47□□□□□ -0.41
DDX56-208ENST00000467318 ITPR2Q14571 2701 aa12.46□□□□□ -0.41
DDX56-208ENST00000467318 SULT1C2O00338 296 aa12.46□□□□□ -0.41
DDX56-208ENST00000467318 ZNF93P35789 620 aaPredicted RBP12.46□□□□□ -0.41
DDX56-208ENST00000467318 HTR2BP41595 481 aa12.46□□□□□ -0.41
DDX56-208ENST00000467318 SFRP4Q6FHJ7 346 aaPredicted RBP12.46□□□□□ -0.41
DDX56-208ENST00000467318 WDR86Q86TI4 376 aa12.46□□□□□ -0.41
DDX56-208ENST00000467318 Q8TCH9 128 aa12.46□□□□□ -0.41
DDX56-208ENST00000467318 RDH5Q92781 318 aa12.46□□□□□ -0.41
DDX56-208ENST00000467318 ZNF436Q9C0F3 470 aaPredicted RBP12.46□□□□□ -0.41
DDX56-208ENST00000467318 MYOZ1Q9NP98 299 aaPredicted RBP12.46□□□□□ -0.41
DDX56-208ENST00000467318 IGKV1-27A0A075B6S5 117 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 IGHV1-69-2A0A0G2JMI3 117 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 A6NLC8 198 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 SMLR1H3BR10 107 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 SLC17A2O00624 439 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 AKR7A2O43488 359 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 CFHR2P36980 270 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 ATP5J2P56134 94 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 CLDN12P56749 244 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 IKZF1Q13422 519 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 MPPED2Q15777 294 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 HFEQ30201 348 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 DEFB113Q30KQ7 82 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 SPRNQ5BIV9 151 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 C6orf183Q5T699 404 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 PRAMEF6Q5VXH4 476 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 GLDNQ6ZMI3 551 aaPredicted RBP12.45□□□□□ -0.42
DDX56-208ENST00000467318 LRRC75A-AS1Q8N1F1 130 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 PNLDC1Q8NA58 520 aaKnown RBP12.45□□□□□ -0.42
DDX56-208ENST00000467318 SCCPDHQ8NBX0 429 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 GPER1Q99527 375 aa12.45□□□□□ -0.42
DDX56-208ENST00000467318 UQCC2Q9BRT2 126 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms