RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 GOLGA8OA6NCC3 632 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 GOLGA6L10A6NI86 522 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 OR5H1A6NKK0 313 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 MIF4GDA9UHW6 222 aaKnown RBP2.02□□□□□ -2.09
XRN1-206ENST00000467077 B4DSR2 109 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 C9JVG2 144 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 ATP6V1G2-DDX39BF2Z307 99 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 GOLGA8NF8WBI6 632 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 GOLGA8RI6L899 631 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 DCTN6O00399 190 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 PIN1P1O15428 100 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 RGS16O15492 202 aaPredicted RBP2.02□□□□□ -2.09
XRN1-206ENST00000467077 FADS1O60427 444 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 ZNF780AO75290 641 aaPredicted RBP2.02□□□□□ -2.09
XRN1-206ENST00000467077 STK16O75716 305 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 SCELO95171 688 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 STAMBPO95630 424 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 KLK1P06870 262 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 MSMBP08118 114 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 PABPC4LP0CB38 370 aaKnown RBP2.02□□□□□ -2.09
XRN1-206ENST00000467077 CPMP14384 443 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 CSNK2A2P19784 350 aaPredicted RBP2.02□□□□□ -2.09
XRN1-206ENST00000467077 ATP6V1B2P21281 511 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 SERPINB1P30740 379 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 MAP3K8P41279 467 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 RFX3P48380 749 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 TGFBIQ15582 683 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 TSNQ15631 228 aaKnown RBP2.02□□□□□ -2.09
XRN1-206ENST00000467077 TRIP13Q15645 432 aaPredicted RBP2.02□□□□□ -2.09
XRN1-206ENST00000467077 TRMT12Q53H54 448 aaKnown RBP2.02□□□□□ -2.09
XRN1-206ENST00000467077 C1orf146Q5VVC0 180 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 ANKRD22Q5VYY1 191 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 Q6ZT83 130 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 SSX8Q7RTT4 187 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 MARCH3Q86UD3 253 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 SYCE1Q8N0S2 351 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 TCAIMQ8N3R3 496 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 TEX29Q8N6K0 151 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 ZDHHC22Q8N966 263 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 ATP6V1C2Q8NEY4 427 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 OR51F2Q8NH61 342 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 DNAJA4Q8WW22 397 aaPredicted RBP2.02□□□□□ -2.09
XRN1-206ENST00000467077 MAIP1Q8WWC4 291 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 CPNE4Q96A23 557 aaPredicted RBP2.02□□□□□ -2.09
XRN1-206ENST00000467077 WDR34Q96EX3 536 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 RNF145Q96MT1 663 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 TBL1XR1Q9BZK7 514 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 POLR2J2Q9GZM3 115 aaKnown RBP2.02□□□□□ -2.09
XRN1-206ENST00000467077 POLR2J3Q9H1A7 115 aaKnown RBP2.02□□□□□ -2.09
XRN1-206ENST00000467077 ANKRA2Q9H9E1 313 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 NTN4Q9HB63 628 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 TREM2Q9NZC2 230 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 MAT2BQ9NZL9 334 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 KIF25Q9UIL4 384 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 BTNL2Q9UIR0 455 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 PSME2Q9UL46 239 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 TMCC3Q9ULS5 477 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 WSB1Q9Y6I7 421 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 CDH10Q9Y6N8 788 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 ZNF780BQ9Y6R6 833 aa2.02□□□□□ -2.09
XRN1-206ENST00000467077 PRKDCP78527 4128 aaKnown RBP2.02□□□□□ -2.09
XRN1-206ENST00000467077 TET2Q6N021 2002 aaPredicted RBP2.01□□□□□ -2.09
XRN1-206ENST00000467077 ROS1P08922 2347 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 TRAV26-1A0A087WT03 109 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 A0A0G2JMP0 313 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 A0A0X1KG70 313 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 PSMB11A5LHX3 300 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 HELTA6NFD8 242 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 GJE1A6NN92 205 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 LYNX1G3V0Z9 82 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 FOXE1O00358 373 aaPredicted RBP2.01□□□□□ -2.09
XRN1-206ENST00000467077 SCAMP2O15127 329 aaKnown RBP2.01□□□□□ -2.09
XRN1-206ENST00000467077 TRAF3IP2O43734 574 aaPredicted RBP2.01□□□□□ -2.09
XRN1-206ENST00000467077 ATP5LO75964 103 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 DIRAS1O95057 198 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 MPZL1O95297 269 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 TTC4O95801 387 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 KRT14P02533 472 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 OR4A8P0C604 315 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 HSMCR30P0CW71 290 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 LYNX1P0DP58 116 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 MLNP12872 115 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 NCK1P16333 377 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 PGAM1P18669 254 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 NPR2P20594 1047 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 OMGP23515 440 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 COX7A1P24310 79 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 HTR1FP30939 366 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 CALCRP30988 508 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 CTRLP40313 264 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 RPL13AP40429 203 aaKnown RBP2.01□□□□□ -2.09
XRN1-206ENST00000467077 IDH3GP51553 393 aaPredicted RBP2.01□□□□□ -2.09
XRN1-206ENST00000467077 EFNB2P52799 333 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 GBX2P52951 348 aaPredicted RBP2.01□□□□□ -2.09
XRN1-206ENST00000467077 TAS2R39P59534 338 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 GPX6P59796 221 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 PSPHP78330 225 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 TGFBR3Q03167 851 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 BAMBIQ13145 260 aa2.01□□□□□ -2.09
XRN1-206ENST00000467077 RIPK1Q13546 671 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms